Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4857 ATGGCAGGAGGAGGAGCAATTGAAAACAAAAACCATGCCAGTAAGAAGAAGTTCGCCATTCTTGGTGTATCTTCAATCTTACTTATTGCCATGGTAGCAGCGGTGGCCGTAGGTGTAAAAGACGGCAACCCAGTTGAATCAGGTGATGATAACCAAATTGCAAAATCACAAAAAAACGTTAAAGTAATCTGTGATACAACAGAGTACAAACAAACATGCGCGAAGACTCTTGAAAAAACAGATAACACAGACATGAAGGGATTGATCAAAGCAGCATTCAATGCAACAGCTGAAGAACTCATTAAACAAATCCATAACTCAACACTCTACCATGAATTAGCTACCAATAACATGACAAAACAAGCTATGGAAATTTGCAAAGAAGTCCTTGGTTATGCAGTTGATGATGTTCATCAATCTATGCACAAACTGGATAGATTTGAACTTAGCAAAATTGATGAGATTGCTTATGATCTTAAAGTTTGGCTCGCAGGTACACTTGCCAATCAACAAACATGTTTAGATGGATTTGAGAACACAACTACTCATGCAGGACAAACCATGGCTAAGGTTCTTAACACCTCATTGGAGCTAAGTAACAATGCTTTGGATATAATCAATGGACTTTCAGGATTTGTGAAAGATCTTAACTTGAGCTCTTTTGCAAGTATTATGAATAATAATAATAATAATAATAGGAAGCTTTTGTCTGAAGATGGTTTTCCATCATGGGTTAGTCAAAGTCAAAGGAAACTTCTTGTGGCTCCTCAAAACCTTAAGCCTAACGTTGTTGTTGCTCAAGATGGTAGTGGACAGTTTAAGACTTTGACTGAGGCACTTGCACTTGTTCCTAAGAAGAACAAAGTTCCTTTTGTTATTCATGTTAAGGCTGGTGTCTATAAGGAGTATGTTTCTTTGGATAAACATAGGGACTTTGTCACTATTATTGGCGATGGTCCCACAAAGACCAAATTTACTGGCAGCAAAAACTATGCTGATGGTGTTCAGACTTACAACACCGCAACATTCAGTGTGAACTCTGCCCATTTCATGGCCATTAACGTTGGATTCGAGAACTCGGCTGGAGCATCAAAGCACCAAGCAGTGGCCCTCCGTGTAACAGCAGACAAAGCAGTGTTCTACAACTGTCAAATGGACGGTTACCAAGACACACTCTACACACAATCGAAAAGACAATTCTACCGCGACTGCACCATCACCGGAACAATTGACTTTATCTTCGGTGACGCTGTCGGAGTTTTCCAAAACTGCAAGCTCATCGTCAGAAAACCAATGCCAAATCAACAATGCATGGTGACAGCAGGTGGAAGAACCAAAATCGACAGTCCATCCGCCCTTGTTTTCCAAAACTGTCACTTCACCGGAGAACCCGAAGTTCTTACCTTGGACCCCAAGATAGCATTTTTGGGAAGACCATGGAGAAATTTCTCCAAGGTTGTGATCATGGATTCTCTCATTGATGGTATCTTTGTACCAGAAGGTTATGTGCCTTGGATGGGAAGTCTTTTCAAAGAGACATGTACTTATTTAGAATACAACAACAAGGGTCCTGGTGCCGCCACTAATCTTAGAGTGAAATGGCCAGGTGTTAAAACCATCACTGCCACTGAAGCTGCTGATTACTATCCAGGAAAGTTTTATGAACTTGCTAACTCATCTCAGCGTGATGCTTGGATTGTTGAATCTGGAGTTCCTTATTCACTTGGACCACTTCCAGCTGGACCACTTCCAGCTTCTGCTTAA 1764 0.4093 MAGGGAIENKNHASKKKFAILGVSSILLIAMVAAVAVGVKDGNPVESGDDNQIAKSQKNVKVICDTTEYKQTCAKTLEKTDNTDMKGLIKAAFNATAEELIKQIHNSTLYHELATNNMTKQAMEICKEVLGYAVDDVHQSMHKLDRFELSKIDEIAYDLKVWLAGTLANQQTCLDGFENTTTHAGQTMAKVLNTSLELSNNALDIINGLSGFVKDLNLSSFASIMNNNNNNNRKLLSEDGFPSWVSQSQRKLLVAPQNLKPNVVVAQDGSGQFKTLTEALALVPKKNKVPFVIHVKAGVYKEYVSLDKHRDFVTIIGDGPTKTKFTGSKNYADGVQTYNTATFSVNSAHFMAINVGFENSAGASKHQAVALRVTADKAVFYNCQMDGYQDTLYTQSKRQFYRDCTITGTIDFIFGDAVGVFQNCKLIVRKPMPNQQCMVTAGGRTKIDSPSALVFQNCHFTGEPEVLTLDPKIAFLGRPWRNFSKVVIMDSLIDGIFVPEGYVPWMGSLFKETCTYLEYNNKGPGAATNLRVKWPGVKTITATEAADYYPGKFYELANSSQRDAWIVESGVPYSLGPLPAGPLPASA* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4857 587 Gene3D - 259 578 IPR012334 -
Mal5g4857 587 Gene3D Invertase/pectin methylesterase inhibitor family protein 54 210 IPR035513 -
Mal5g4857 587 PANTHER PECTINESTERASE 10 581 - -
Mal5g4857 587 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 58 210 IPR035513 -
Mal5g4857 587 ProSitePatterns Pectinesterase signature 2. 406 415 IPR033131 -
Mal5g4857 587 Pfam Plant invertase/pectin methylesterase inhibitor 60 205 IPR006501 GO:0004857
Mal5g4857 587 CDD PMEI-like_3 63 211 - -
Mal5g4857 587 ProSitePatterns Pectinesterase signature 1. 287 306 IPR018040 -
Mal5g4857 587 PANTHER PECTINESTERASE 10 581 - -
Mal5g4857 587 SUPERFAMILY Pectin lyase-like 259 554 IPR011050 -
Mal5g4857 587 TIGRFAM PME_inhib: pectinesterase inhibitor domain 53 209 IPR006501 GO:0004857
Mal5g4857 587 Pfam Pectinesterase 262 553 IPR000070 GO:0030599|GO:0042545
Mal5g4857 587 SMART PMEI_2 55 205 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4857 Mal-Chr5 121781897 121783733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4857 15 586 Carbohydrate Esterase AT3G05610 45.017 0.0 539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4857 K01051 - gmx:100800194 820.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4857 5 121781897 121783733 Mal4g3675 4 108462506 108464787 PCT