Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4839 ATGCTAACATGTGCCCTTATGACACATGTTAAGGAGCCACAAATAGTAATTTTATCTCAAAACATGAATCCATCGTCTATTCCAGTAGTCGATTGTGTAGAGAAATTGGTAAACACTATTCATGAACAAAATCATGTGCAAGAAAGTATTGCCGACATCGAACCTCACTTAGAAATGATGTTTGAATATGAGGCAGTTGCTTATGAATTTTATAATGAGTACAGTAAAAGAATTGGATTTGGTATTCGTCGAGAATATGCAAATAAAAGCAAAAAAGATGGAGTTTTGACTTCAAGAAGATTCACATGCTTCAAAGAAGGCACACGAGGTGTTGACAAACGACGTCAACCGACAGGGGAGCCTACAGCAGAAACTAGAACGGGATGTCTTGCGCGTATGGGTATTTCACTTGATCGAAAGATAGGGAAATATAAGGTAGTTGACTTTGTAGCTCAACATAACCACTCTCTTCAACCGCCAGAGCATGTCCACATGATTCGCTCTCATCGACGCATATCTGAGGCACAAGCATCACAAATTGTAATTGGAGATGAATCTGGATTAAAACCAAAAGATTTGTATGTATATATGTCCAAGCAGGCTGGTGGGATAGAGATGGTTGGCTTTACAAGCCAAGACCTTAAGAATTTGCTTCGAACAAAAAGGATGAAATCACTAAAGTATGGTGAAGTGGGCGCATTGATGACTTATTTCAAACAAGAAAGTGAAAATCCTTCTTTCTTTTATGACTTTCAAATGGATGTTGAAGAGCAAATAACAAACATATTTTGGGCGGATGCACAAATGATAAATGATTATGGGTACTTTGGTGATGTCATCACTTTTGACACCACATACAAGACAAATAAGGATTATCGGCCGTTGGAAGTATTTGTTGGACTTAATAATCACCGACAAACAGTCATTTTTGGGGCAGCATTGTTATATGATGAAACAATTCCGTCTTTTCGATGGTTATTTGAAACTTTTCTCAAAGCAATGGGTGGAGAAAAGCCTAAAAGCATTCTAACAGATCAAGATGCCGCAATGGCTAATGCTATTTCTTTAGTTATGCCTGAAACATTTCATGGATTGTGCACTTGGCATATAAGACATAACGCTTTAAGGCATGTGAACCATCTATATCAAAAGAGTTCTCACTTTTGTTCGGATTTTGAAGCATGCGTAGATCTACATGAAGAGGAAGATGAACTTTTGAATGGATGGAACTCTTTACTTGTACGTATTTTTATTTTTTTCTATCAAAGCAAAAACTAG 1278 0.3717 MLTCALMTHVKEPQIVILSQNMNPSSIPVVDCVEKLVNTIHEQNHVQESIADIEPHLEMMFEYEAVAYEFYNEYSKRIGFGIRREYANKSKKDGVLTSRRFTCFKEGTRGVDKRRQPTGEPTAETRTGCLARMGISLDRKIGKYKVVDFVAQHNHSLQPPEHVHMIRSHRRISEAQASQIVIGDESGLKPKDLYVYMSKQAGGIEMVGFTSQDLKNLLRTKRMKSLKYGEVGALMTYFKQESENPSFFYDFQMDVEEQITNIFWADAQMINDYGYFGDVITFDTTYKTNKDYRPLEVFVGLNNHRQTVIFGAALLYDETIPSFRWLFETFLKAMGGEKPKSILTDQDAAMANAISLVMPETFHGLCTWHIRHNALRHVNHLYQKSSHFCSDFEACVDLHEEEDELLNGWNSLLVRIFIFFYQSKN* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4839 425 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 35 413 IPR031052 GO:0006355
Mal5g4839 425 Pfam MULE transposase domain 279 373 IPR018289 -
Mal5g4839 425 PANTHER OS03G0181600 PROTEIN 35 413 - -
Mal5g4839 425 Pfam FAR1 DNA-binding domain 69 159 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4839 Mal-Chr5 121580880 121583498 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal5g4839 MULE 4.8e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4839 - - cam:101500125 673.7