Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4821 ATGATTCACTGTCACCGCCTCAGAGCTATTCTCTACTCCCCAACCCCGAAATGTTGTTACCTTCTTCTTCTTCTTCTGCAACCCCACCACTCTCTTAATAGTAACTTGTTCTTCACCACCACTTCTGATTCAGATCAACCATCTTTCGCCGTTTCCTACCTCACCAACAATTGTGGTTTATCTCCACAAGATGCTCTCAAAGCATCCAAACGACTCCGTTTCAAAACCCCGGAGAAACCCGATTCTTTTATCTCCTTCTTCAAAACCCACGGTTTCTCCATTCACCAGATTCAATCCATCATTCGCAGGGATCCAGAGCTTATCGTTTTCAACCCAATTAAAACCATTTTGCCAAAGTTTCAATTTTTATCCTCCAAAGGTGCTTCTCCCCAAGACATAGTTCTCACCGTTACTAGAAACCCTCGTTTCCTTTGTGTAAGCCTTGACAAACAAATTATCCCTACTTTTGATTTGGTAAGAACTTTCTGTCCCTCTGATAAAAAAGCTATTGATTCTATAATCGCTTGTCCAACTTCAATTAGTGATGCTCGCATGAAACCAAATGTCAAATTTTTGCTTGATTGTGGTATCACTCCTTCAAATATTTACCTTTTTCTTAGGACAAGACCTTCTATAATATGTTCTAAGGATTTGAGACAAGCTGTGGTGGAAATTAAGGAATTAGGGTTTGACCAATCCAAATTAAATTTTGGTGTGGCATTATTGGCCAAAAGGGCTGTCACTAAATCCCAGTGGGATGCAAAAGTTGATGCCTTGAAGAGTTGGGGTTGTTCTGAAGATGCAATTTTGAATGCATTTAGGAAGCAACCCAACTTTATGCTACGCTCTCCGGATAAACTCAATGCAGTTATGAGTTTTTGGGCAGAGGAGCTTGGTTGGGATCCTTCGCTGCTCTTAGCTGCACCGACACTTTTTGGATATAGTATAGAGAAAAGGCTTAGTCCAAGGGCTTCAATTGTCAAGCATCTTCTATCCAAAGGTTTGATGAAGGAGGGTGCTAGCTTATATACACCATTTTATTTGAGTGATGAGGATTTCCAGCGAAGGTATGTGAAACGCTTTGAGATGGAATCATCTAAGCTAGTAAACATAAATCAGGGAGAATGCTAG 1131 0.4067 MIHCHRLRAILYSPTPKCCYLLLLLLQPHHSLNSNLFFTTTSDSDQPSFAVSYLTNNCGLSPQDALKASKRLRFKTPEKPDSFISFFKTHGFSIHQIQSIIRRDPELIVFNPIKTILPKFQFLSSKGASPQDIVLTVTRNPRFLCVSLDKQIIPTFDLVRTFCPSDKKAIDSIIACPTSISDARMKPNVKFLLDCGITPSNIYLFLRTRPSIICSKDLRQAVVEIKELGFDQSKLNFGVALLAKRAVTKSQWDAKVDALKSWGCSEDAILNAFRKQPNFMLRSPDKLNAVMSFWAEELGWDPSLLLAAPTLFGYSIEKRLSPRASIVKHLLSKGLMKEGASLYTPFYLSDEDFQRRYVKRFEMESSKLVNINQGEC* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4821 376 Pfam mTERF 84 235 IPR003690 GO:0003690|GO:0006355
Mal5g4821 376 Pfam mTERF 185 354 IPR003690 GO:0003690|GO:0006355
Mal5g4821 376 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 15 374 - -
Mal5g4821 376 PANTHER CGI-12 PROTEIN-RELATED 15 374 IPR003690 GO:0003690|GO:0006355
Mal5g4821 376 SMART mt_12 98 129 IPR003690 GO:0003690|GO:0006355
Mal5g4821 376 SMART mt_12 134 166 IPR003690 GO:0003690|GO:0006355
Mal5g4821 376 SMART mt_12 270 301 IPR003690 GO:0003690|GO:0006355
Mal5g4821 376 SMART mt_12 170 198 IPR003690 GO:0003690|GO:0006355
Mal5g4821 376 SMART mt_12 302 336 IPR003690 GO:0003690|GO:0006355
Mal5g4821 376 Gene3D Transcription termination factor 3, mitochondrial 59 180 IPR038538 -
Mal5g4821 376 Gene3D Transcription termination factor 3, mitochondrial 181 365 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4821 Mal-Chr5 121456804 121457934 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mal5g4821 mTERF 1.5e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4821 K15032 - gmx:102666739 329.717