Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4818 ATGTTGAAATTGGTCTGCCAGAGTGCCCTGGTTCGCTCCCAGGCCAAGGGTTTTCTTCTCCTATTCCCAACAACAACATCTACACCACTTTCTTCTTCTTCTTCCATCCATTCCATTTCCACTTCCACCACTCACTCTTTCACTGTTTCCTACCTCATCAACAATTGCGGCTTCTCCCCTCAATCCGCACTCAAAGTTTCCCACAAGCTCACTCTCTCCGATTCCCAAAATCCCGATTCAATTCTCGCTCTCTTTACAACCCATGGTTTCTCCAACTCTCAAATTCACGATATCATCAAAAGGGAACCTGGGTTACTCGCATGTGTCCACCCTAACAAGCTACTTTTACCAAAGTTTCAATTTTTACTCTCCAAAGGTGCTTCTTCCACTGATATTGTTCGCATTGTCACTGCTAACCCTAAATTTCTCTTAAGAAGCTTGCACAATCATATTATCCCTACTTATGATTTTGTTAGAGGCTTCCTTCAATCTGATAAACAAACCATTACATGTATTAATCGTTATGCTTTTTTTATTTCTGATTCTCGTATCGAAAGTAATGTTAAATTGTTGCTTGATAATGGAGCCACACACTCAAACATTGGTGCATGGTTTCGTACTTTGTCTAGGATCTATTGTTCATCTAACTTGTTGGAGACTATTCATGAATTAAAGCAATTGGGTTTCAATTCTTCAACTTCAACTTTTGCTGTTGCATTGGTTGCTAAGAAAACTCTCACCAAAGCCAAGTGGGATGAGAAAGTTGAAATCTATAAGAAATGGGGTTGGTCTGATCAACACATTCTTCAAGCATTTAGGAAGCAGCCTTACTGTATGTTGACATCCGTTCGAAAAATCAATGCAGTTTTGAGTTTTTGGGTTGATCAATTAGGTTTGAATTCTTTGGATCTTGTTAATGCTCCGGGAATCTTTCTATTGAGACTCGAGAAGCGGGTTATTCCAAGGGCTGCAGTTTTGAAGTTCCTTGTATCTAAAGGTTTGAGAAGAAAGGACGCCGCACTAAGTACACCATTTTCTATGTCAGAGAAGTTGTTTTTGGACAAGTTTGTGAATTGTTTTAAGGAGGATTCTACTCATTTGTTGAAGCTGTATCAGGAAAAAATGAATCTTGCAAATAGCATGGAGAAGCCTTCACCAAGTGTGTAA 1167 0.3942 MLKLVCQSALVRSQAKGFLLLFPTTTSTPLSSSSSIHSISTSTTHSFTVSYLINNCGFSPQSALKVSHKLTLSDSQNPDSILALFTTHGFSNSQIHDIIKREPGLLACVHPNKLLLPKFQFLLSKGASSTDIVRIVTANPKFLLRSLHNHIIPTYDFVRGFLQSDKQTITCINRYAFFISDSRIESNVKLLLDNGATHSNIGAWFRTLSRIYCSSNLLETIHELKQLGFNSSTSTFAVALVAKKTLTKAKWDEKVEIYKKWGWSDQHILQAFRKQPYCMLTSVRKINAVLSFWVDQLGLNSLDLVNAPGIFLLRLEKRVIPRAAVLKFLVSKGLRRKDAALSTPFSMSEKLFLDKFVNCFKEDSTHLLKLYQEKMNLANSMEKPSPSV* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4818 388 Pfam mTERF 180 352 IPR003690 GO:0003690|GO:0006355
Mal5g4818 388 Pfam mTERF 82 299 IPR003690 GO:0003690|GO:0006355
Mal5g4818 388 Gene3D Transcription termination factor 3, mitochondrial 160 370 IPR038538 -
Mal5g4818 388 PANTHER CGI-12 PROTEIN-RELATED 25 380 IPR003690 GO:0003690|GO:0006355
Mal5g4818 388 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 25 380 - -
Mal5g4818 388 SMART mt_12 133 164 IPR003690 GO:0003690|GO:0006355
Mal5g4818 388 SMART mt_12 96 128 IPR003690 GO:0003690|GO:0006355
Mal5g4818 388 SMART mt_12 301 335 IPR003690 GO:0003690|GO:0006355
Mal5g4818 388 SMART mt_12 269 300 IPR003690 GO:0003690|GO:0006355
Mal5g4818 388 SMART mt_12 169 197 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4818 Mal-Chr5 121375872 121377038 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mal5g4818 mTERF 9.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4818 K15032 - gmx:102667698 399.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4818 5 121375872 121377038 Mal4g3847 4 112339345 112340511 PCT