Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4817 ATGCTGAAATTCCTTTCCCACAGTGCCATGGTTCGTCCCCAGGTCAAGGGTTTTCTTTTTCTATCCACAACAACACGTTCCTCTTCTCTCTCTTCCAATTTCAATTTCCGCTGCATTTCCACTTCCACCTCCTCTCACTCTTTCACCGTCTCTTACCTCATCAACAATTGCGGCTTCTCCCCACAATCCGCACTCAAAGCTTCCCACAAGCTCACTCTCTCCAATTCCCAAAAACCCGATTCAATTCTCGCCTTCTTCACAACCCATGGTTTCTCCAACTCTCAAATTCATGATATCATCAAAAGGGAACCTGGGCTACTCTTATTCGCTGACCCCAACAAGGTACTTTTACCAAAGTTTCAATTTTTACTCTCCAAAGGTGTTTCCATCTCTGATATTGTTCGCATTGTCAATGCTAACCCTAAATTTCTCTTAAGAAGCTTGCACAATCATATTATCCCTACTTATGATTTTGTTAGAGGCTTCCTTCAATCTGATAAACAAACCATTACATGTATTAATCGTTATGCTTCTTTTATTTCTGATTCTCGTATCGAAAGTAATGTTAAATTGTTGCTTGATAATGGAGCCACAAATTCAAACATTGCTACATTGTTACGTGGTGCGCCTAGGATGTATTGTTCATCGAACTTGTTGGAGACTATTCAGGAATTGAAGCAACTAGGTTTCAATGCTTCAACTTCAACTTTTGCTGTTGCGTTGGTTGCTAAGAGAACCGTGAATGAAACTAGGTGGGCTGAGAAAGTTGAAATTTTTAAGAAATGGGGTTGGTCGGATGAAGACATTCAACGTGCATTTAGGAAGCAACCTTATTGTATGTTGTCATCAGCTCGAAAAATTGATGCAGTTTTGAGTGCTTGGGTTGATCAGTTAGGTTTGAATTCTTTGGACCTTGTTAATGCTCCGGGAATCTTTCTATTTAGACTCGAGAAGCGGGTTATTCCAAGGGCTGCAGTTTTGAAGTTCCTTGTATCTAAAGGTTTGAGAAGAAAGGACGCGGCACTAAGTACACCATTTGCTATGTCAGAGAAGTTGTTTTTGGACAAGTTTGTGAATTGTTTTAAGGAGGATTCTACTCATTTGTTGAAGCTGTATCAGGAAAAAACGAATCTTGCAAATAGCATGGAGAAGAAGCCTTCATCAAGTGTGTAA 1173 0.4007 MLKFLSHSAMVRPQVKGFLFLSTTTRSSSLSSNFNFRCISTSTSSHSFTVSYLINNCGFSPQSALKASHKLTLSNSQKPDSILAFFTTHGFSNSQIHDIIKREPGLLLFADPNKVLLPKFQFLLSKGVSISDIVRIVNANPKFLLRSLHNHIIPTYDFVRGFLQSDKQTITCINRYASFISDSRIESNVKLLLDNGATNSNIATLLRGAPRMYCSSNLLETIQELKQLGFNASTSTFAVALVAKRTVNETRWAEKVEIFKKWGWSDEDIQRAFRKQPYCMLSSARKIDAVLSAWVDQLGLNSLDLVNAPGIFLFRLEKRVIPRAAVLKFLVSKGLRRKDAALSTPFAMSEKLFLDKFVNCFKEDSTHLLKLYQEKTNLANSMEKKPSSSV* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4817 390 Gene3D Transcription termination factor 3, mitochondrial 165 370 IPR038538 -
Mal5g4817 390 Pfam mTERF 248 353 IPR003690 GO:0003690|GO:0006355
Mal5g4817 390 Pfam mTERF 83 291 IPR003690 GO:0003690|GO:0006355
Mal5g4817 390 SMART mt_12 97 129 IPR003690 GO:0003690|GO:0006355
Mal5g4817 390 SMART mt_12 203 231 IPR003690 GO:0003690|GO:0006355
Mal5g4817 390 SMART mt_12 302 336 IPR003690 GO:0003690|GO:0006355
Mal5g4817 390 SMART mt_12 270 301 IPR003690 GO:0003690|GO:0006355
Mal5g4817 390 SMART mt_12 170 198 IPR003690 GO:0003690|GO:0006355
Mal5g4817 390 SMART mt_12 134 165 IPR003690 GO:0003690|GO:0006355
Mal5g4817 390 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 27 380 - -
Mal5g4817 390 PANTHER CGI-12 PROTEIN-RELATED 27 380 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4817 Mal-Chr5 121370710 121371882 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mal5g4817 mTERF 6.4e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4817 K15032 - gmx:102667698 409.453