Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4814 ATGTTGAAATTATACACCACCAAGAATATTATGCTCCTATTCACAAAACCATCTTCATGGAGTAGTTCTTCTCCTATTCCAAAACACTATTACCCATCAATTTTCAAATTTTTCTACTCCACTTCCACCACCTTCGACCCACATTCTTTCACCGTATCTTACCTCATCAACAATTGTGGCTTCTCCCCTAAAACCGCTTCCAAAGCATCACAAAAGCTTACTCTCTCCAACTCACAAAAACCTGATTCAATTCTCGCCTTCTTCGCAACCCATGGTTTCTCCAACTCTCAATTACGCTGTATCCTGATAAAGAAACCCATGCTACTCTCATGCTCCGACCCCAACAAGCTACTTTTACCAAAGTTTCAATTTTTACTCTCCAAAGGTGCTTCCATTTCTGATATTGTTTGCATTGTCAATGCTAACCCTAAATACCTCTTAAGAAGCTTGCGCAATCATATAATCCCTACTTATGAAATTGCTAAAGGGTTTCTCCAATCTGACAAAAAAACCATTGCTTGTGTAAAACGTTATTGTTTTCTTTCTGAAAATGGCGTGCCAATGAATGTCAAATTGTTGCTTGATAATGGAGTTTCACACTCAAACATTGCTAGATTGTTTCGTTGGTGGCCCAGTGTACTATGCTCATCTGATTTGTTGAATACTGTTGAGGAATTGAAGCAACTCGGTTTCAATACCTCAAATTCGGCTTTTAGTGTGGCAGTTCTTGCAAAGACAAGTGTCACCAAAGCCAAGTGGGATGAGAAAGTTGAAATCTTTAAGAAATGGGGTTGGTCTGATGAACACATTCTTCAAGCGTTTAAGAAGCAGCCTAATTGTATGTTGTCGTCCGCTCATAAAATCAATGCAATCATGAGTTTTTGGGTTCACCACTTAGGTTTTGATTCTTTGGACCTTGCCAGAGCTCCTGGAATTCTTCAGTGCAGTCTCAAGAAGAGGATTATTCCTAGAGCTTCGGTTGTGCAGTTTCTTATCTCAAAAGGCCTGAGACGAAAGGATGCAGGCATATATACTCCATTTGTTCTATCTGAGAAGTTGTTCGTGGAAAAGTTTGTCAACGGTTTTGAGGAGTATTTTTCTGATCTGTTAAAGCTTTATGAGGAAAATATGAATCTTGCAAATAGGGGTGTAAACCATGTTGATCAAATTTTGGTTTGA 1179 0.3893 MLKLYTTKNIMLLFTKPSSWSSSSPIPKHYYPSIFKFFYSTSTTFDPHSFTVSYLINNCGFSPKTASKASQKLTLSNSQKPDSILAFFATHGFSNSQLRCILIKKPMLLSCSDPNKLLLPKFQFLLSKGASISDIVCIVNANPKYLLRSLRNHIIPTYEIAKGFLQSDKKTIACVKRYCFLSENGVPMNVKLLLDNGVSHSNIARLFRWWPSVLCSSDLLNTVEELKQLGFNTSNSAFSVAVLAKTSVTKAKWDEKVEIFKKWGWSDEHILQAFKKQPNCMLSSAHKINAIMSFWVHHLGFDSLDLARAPGILQCSLKKRIIPRASVVQFLISKGLRRKDAGIYTPFVLSEKLFVEKFVNGFEEYFSDLLKLYEENMNLANRGVNHVDQILV* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4814 392 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 19 382 - -
Mal5g4814 392 PANTHER CGI-12 PROTEIN-RELATED 19 382 IPR003690 GO:0003690|GO:0006355
Mal5g4814 392 SMART mt_12 204 232 IPR003690 GO:0003690|GO:0006355
Mal5g4814 392 SMART mt_12 99 131 IPR003690 GO:0003690|GO:0006355
Mal5g4814 392 SMART mt_12 271 302 IPR003690 GO:0003690|GO:0006355
Mal5g4814 392 SMART mt_12 136 167 IPR003690 GO:0003690|GO:0006355
Mal5g4814 392 SMART mt_12 303 337 IPR003690 GO:0003690|GO:0006355
Mal5g4814 392 Pfam mTERF 85 175 IPR003690 GO:0003690|GO:0006355
Mal5g4814 392 Pfam mTERF 182 341 IPR003690 GO:0003690|GO:0006355
Mal5g4814 392 Gene3D Transcription termination factor 3, mitochondrial 183 372 IPR038538 -
Mal5g4814 392 Gene3D Transcription termination factor 3, mitochondrial 51 182 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4814 Mal-Chr5 121353349 121354527 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mal5g4814 mTERF 2.8e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4814 K15032 - gmx:102667698 374.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4814 5 121353349 121354527 Mal4g3843 4 112259873 112261039 PCT