Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4808 ATGCAGCTATTCACAAGATCATGTACATGGGGTTATTCTTCTTATCCTCTCGCCAGATACAGATTCTTCTGCGTTTCTACTTCCCCTTCAACCTCTAACTCTTTCACCGTCTCTTTCCTCATCAATAATTGTGGCTTCTCCCCTCAAACCGCTTCTAAAGCTTCCCGGAATCTTACTCTCACCAGCTCCGAAAACCCCGATTCAGTTCTCGCCTTTTTCAGATCCCATGGCTTCTCCGACTCTCAATTACGCTATATCCTAATAAAGAAACCCATGCTACTCTCATGCCCCGACCCCAACAAGGTACTTTTACCAAAGTTTCAATTTTTACTCTCCAAAGGTGCTTCTTCCTCTGATATCGTTCGCATTGTCACTGGAAGACCTAAATTCCTCTTAAGAAGTTTGCACAATCATGTAATCCCTACTTATGATTTTCCTAAAAGATATTGTTTACTTTGTAGTGATTGTGTCACAAGTAATGTCAAATTGTTGCTTGATCAAGGAATCACCAATACCGTCATTGCAATGTTGTTTCGTAATTGGCCTAGGATATATTGCTCTTCCAACTTGTTGAACTCTGTTCAAGAATTAAAGCAACTGGGTTTCAATTCTTCAACTTCAACTTTTGGGATTGCCATGATTGCTAAGATAAGTGTCCCCAAAGCCAAGTGGGATGACAAAGTTGAAACCTATAAGAAATGGGGTTGGTCTGATGAACAAATTATTCATGCATTTAAGAAGCAACCTTATTGTATGTTGTCATCCACTCGTAAAATCGATGCAGTCATGAGTTTTTGGGTTCATCATTTAGGTTTTAATTCTTTGGACCTTGTCAGTGCTCCAAGAATTTTTCAACTGAGTCTTGACAAGAGGATTATTCCGAGGGCTTCAGTTCTGCAGTTTCTTATATCAAAAGGTCTGAGGAAAAAGGATGCCTCCTTAGTGACACCGTTTTATCTTACGGATAAGTTGTTTCTAGAGAAGTTTGTGATATGTTTTCAGGAGGATTCATCTCATTTGTTAAAGTTGTATGAGGAAAAATTGAATCTTGCAAAGAGAGTGGTGAAGTCTTTGCCTGGTGTGTAA 1086 0.3932 MQLFTRSCTWGYSSYPLARYRFFCVSTSPSTSNSFTVSFLINNCGFSPQTASKASRNLTLTSSENPDSVLAFFRSHGFSDSQLRYILIKKPMLLSCPDPNKVLLPKFQFLLSKGASSSDIVRIVTGRPKFLLRSLHNHVIPTYDFPKRYCLLCSDCVTSNVKLLLDQGITNTVIAMLFRNWPRIYCSSNLLNSVQELKQLGFNSSTSTFGIAMIAKISVPKAKWDDKVETYKKWGWSDEQIIHAFKKQPYCMLSSTRKIDAVMSFWVHHLGFNSLDLVSAPRIFQLSLDKRIIPRASVLQFLISKGLRKKDASLVTPFYLTDKLFLEKFVICFQEDSSHLLKLYEEKLNLAKRVVKSLPGV* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4808 361 PANTHER CGI-12 PROTEIN-RELATED 25 353 IPR003690 GO:0003690|GO:0006355
Mal5g4808 361 Gene3D Transcription termination factor 3, mitochondrial 145 342 IPR038538 -
Mal5g4808 361 SMART mt_12 274 308 IPR003690 GO:0003690|GO:0006355
Mal5g4808 361 SMART mt_12 175 203 IPR003690 GO:0003690|GO:0006355
Mal5g4808 361 SMART mt_12 84 116 IPR003690 GO:0003690|GO:0006355
Mal5g4808 361 SMART mt_12 121 153 IPR003690 GO:0003690|GO:0006355
Mal5g4808 361 SMART mt_12 242 273 IPR003690 GO:0003690|GO:0006355
Mal5g4808 361 Pfam mTERF 70 147 IPR003690 GO:0003690|GO:0006355
Mal5g4808 361 Pfam mTERF 157 325 IPR003690 GO:0003690|GO:0006355
Mal5g4808 361 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 25 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4808 Mal-Chr5 121291921 121294389 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mal5g4808 mTERF 2.5e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4808 K15032 - gmx:102667698 369.392