Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4791 ATGTCAACCTCTAAAAAGATCACATCAGATTCATCTTTCAAAGGATATCATGAAACAAATCAAACACAAATGTGTCTGTCTCTACTTCAAAGGAACACCAACACATCAGTTTGTGGTGAAAAGAGAGGAAGAAGGAAACAAACAGAACCAGGAAGGTTTCTTGGTGTTAGGAGAAGACCTTGGGGTAGATATGCTGCTGAAATTAGAGATCCTACAACTAAAGAAAGACATTGGCTTGGTACTTTTGATACTGCTCAAGAAGCTGCTCTTGCTTATGACAGAGCTGCTATTTCCATGAAAGGAAACCAAGCTAGAACAAATTTCATTTACTCTGATACCATCAATTTTCACACACTTGTTTCTTCTCCTATAGATCTTCAAACTCTCTTACCAGTTTCACAGTTACTCACTAGTAACACTCAAACAAATCAAAATAGTACTGTTTCTCACCTTAACACTTCACACACTAGTGGAAATGATCAAAACATTTCCTCATTGAACAATGACTTAATCATGAGTACTGTTGATCATGAAAAAACAACATCTTATGGATCAACTCATGATAATAATTTCTTCTTTTCCAATGACACTAATAACTCTGGCTATTTAGAATGCATTGTTCCTGATAACTGTTTCAGACCTGCTTCAAACTCAAGAAACAGCAATGTAAGTGCTTCAAGTGATGAAAAAGTTGATAACAATGCTGAAAGCAACAAAACTTCAATGGAAGGTCAATCACATTTTGGTATGACTTCATTCTCTCAAGAAATTCCAACAAGGGTCTCTAACTTTTCAGAGTTTTCTTATTGTCCAAGTGAAATCAGTCAAGGTTTCTTGGATTGGAATTCTAATGAACTTTCAGCTATATTTAACAACAATCCATTAAGAGTTGAAGATGAATGCATGGATACATTAATGTATCCTAATTATCCCATCATTGAAAATCTAAGTCAAAACTATGTGATGATGAATGATCAAGCTGCTTCTTCAACTAACTATTCTCCATCACTTGAATTTGGTTACCCTCTCTTTTAA 1035 0.3478 MSTSKKITSDSSFKGYHETNQTQMCLSLLQRNTNTSVCGEKRGRRKQTEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAQEAALAYDRAAISMKGNQARTNFIYSDTINFHTLVSSPIDLQTLLPVSQLLTSNTQTNQNSTVSHLNTSHTSGNDQNISSLNNDLIMSTVDHEKTTSYGSTHDNNFFFSNDTNNSGYLECIVPDNCFRPASNSRNSNVSASSDEKVDNNAESNKTSMEGQSHFGMTSFSQEIPTRVSNFSEFSYCPSEISQGFLDWNSNELSAIFNNNPLRVEDECMDTLMYPNYPIIENLSQNYVMMNDQAASSTNYSPSLEFGYPLF* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4791 344 SUPERFAMILY DNA-binding domain 53 110 IPR016177 GO:0003677
Mal5g4791 344 SMART rav1_2 52 115 IPR001471 GO:0003700|GO:0006355
Mal5g4791 344 Gene3D AP2/ERF domain 52 110 IPR036955 GO:0003700|GO:0006355
Mal5g4791 344 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 338 - -
Mal5g4791 344 Pfam AP2 domain 55 101 IPR001471 GO:0003700|GO:0006355
Mal5g4791 344 ProSiteProfiles AP2/ERF domain profile. 52 109 IPR001471 GO:0003700|GO:0006355
Mal5g4791 344 PRINTS Ethylene responsive element binding protein signature 75 91 IPR001471 GO:0003700|GO:0006355
Mal5g4791 344 PRINTS Ethylene responsive element binding protein signature 53 64 IPR001471 GO:0003700|GO:0006355
Mal5g4791 344 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF086 1 338 - -
Mal5g4791 344 MobiDBLite consensus disorder prediction 217 246 - -
Mal5g4791 344 CDD AP2 52 108 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4791 Mal-Chr5 121114936 121115970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4791 1 214 AP2-EREBP Transcription Factor Family AT5G18560 45.455 1.21e-58 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal5g4791 AP2 2.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4791 - - cam:101500468 452.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4791 5 121114936 121115970 Mal4g4323 4 120700909 120701784 PCT