Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4786 ATGGCAGAATCACTCCTCTTCAGCGTGGCAGAGTCATTCATCGGAAAACTTGCATCTGTTGCAGTTGAAGAAGCTTCTCAAGCGCTCGGCGTCTTCGACAATCTTCAAGAAATCAAAAACACTGTCTCACTCCAATGGAAGAACCATGAGCTGCGAGAATGGTTGAAACAGATTAAGCGTGTCTTCTACGATGCCGAAGATGTAATCGATGATTTTGAATGTGAGGCGTTGCAGAAGCACATCATCAACACTGTAAAATGTTTCTTCTCAAATTCTAATCCTCTTGCTTATCGCCTTAAAATGGCACATCAAATCAAACATATTAAAGAGAGATTCGATAAGGCTGCTGCTGATAGGCTTAAGTTTGGTCTTCAAATCAATGATACTGATAATCGTGTTGTAAAAAGGCGCGAATTAACACATTCATATGTCATTGATTCTGATGTGATAGGAAGAGAACATGATAAACAAAAAATCATTGATATGTTATTGCAAGAGACTGGTGATAGTAATAGTCTCTCTGTTATTCCAATTGTTGGAATTGGAGGATTAGGAAAAACTACACTTGCAAAGGCGGTCTTTAATGATAAGAGTTTAGATGAGACTTTTCAGTTGAAGATGTGGGTGTGTGTCTCTGATGATTTTGAACTTAAGAATCTACTTATTAAAATCATCAATTCAGCTAGTGATAGTGGTTCTACTGCTCCTAACCCAATTCACCCAGAGAATTTTAGAAACCTTGAATTGGAGCAGCTACAAAATCATCTGAGAAACATGATAGCTGGTAAAAAATTCTTGCTCGTCTTGGACGATATATGGAACGAGGATCGTGTTAAATGGGTTGAGTTGAAGAATTTAATACAAGTAGGTGCCGAAGGAAGTAAAGTCTTAGTGACTACACGTAGCCACTCTATTGCCAAAATGATGGGCACCAACACATTATACATTTTGAAATTGGAAGGTCTTTCTAGAGAGGATTCTTTGTCTGTATTTATCAAATGGGCTTTTAAAGAGGGAGAAGAGAAGCATTATCCAGAACTGATGGAGATTGGGAAAGAAATTGTGCAAAAATGTGGAGGGCTTCCTTTGGCCCTTAGAACATTGGGGAGTTCTCTATTCTTAAAAGTTGATATAGAAGAGTGGAAGTTTATCAGAGACAATGACATTTGGAATTTACCACAAAAAGAGGACGACATTTTGCCTGCTATTAAATTAAGTTATGACCAATTACCTTCTTATTTAAAACGATGTTTTGCTTGCTTCTCCCTCTTTGAAAAGGACTTTCAATTTTCTAATTTTCATGTTAGTGTGCTATGGGAGGCACTTGGTTTTCTTCCGCCACCAAACAAGGGTAAAACCTTGAATGATATTAGCAATCAGTTTCTGCGCGAGCTTCAGTCAAGATCATTTCTTCAAGATTTTGAAGACTTTGGCGGTGGTGCTAGTATATTTAAATTGCATGATTTAGTGCATGATCTTGCACTGTATGTTGCAAGAGATGAGTTTCAATTGTTGAAATTTCATAGTGAAACTATATTGGAGAATATCCTTCATTTGTCATTTATTCAAAATGATTTGCTTGGCCTAACACCAATTCCCTATGGTCTGAGAACCATGCTATTTCCTATGGGAGCCAATAATGAAGCTTTCTTGAATGCTTTGGTGTCAAGGTGCAAATTCTTGCGTGTTTTACAGTTAGCTAATTCTACATATGAGAGTTTGCCCAGATCTATTGGCAAATTAAAACATTTAAGATATCTCAATCTTGAAAATAGTAAAGAATTGAAGAACCTCCCTGATTCAGTGTGCAAACTCCAGAATTTGGTTAATTTAAAACTCGATGGTTGCATAAAGCTTCAAACATTACCCAATGGAATAGGAAATTTGATCAGACTTCAGCAGCTGCACATAACTACAAAGCAAGTTAATTTCCCAGACAAAGAGATTGCAAAATTGACTTCTTTAGAAATATTAAATGTCGAATCTTGTGACAATCTAGAGACGTTGTTGATTGAAGGAATACAACTTTCTAATCTTAAGTGGTTGGCCATTTCTTCTTGTGAGAATCTAAAGTCTGTGCCACTTCATGTTATTCCCCACTTAGAGGCTTTGGGGATTAGTGATTGCCATAAGTTGATATTGCCATTAGGCCATGACAATCAAATCCCAAAGTTAAAGTTTCTATCTCTTCAATCTTTGCCACAACTTGTGAGTTTACCTGAATGGTTGCAAGGATTTGTGGACACATTAAACACCTTGGAAATAGCGAATTGCGAAAATCTGGGTGAGCTTCCCGAGTGGTTATCAATTCTAATTTGTCTCGAAAAACTTGCAATTCGAAATTGTCCGAAATTGCTTTCGCTCCCCGATGGCGCGCACTGCCTTCCGAACCTTGAAAATTTACAAATTGAAGGTTGTCCTGAATTATGTAGAAGATACCAACCAGAAGTTGGACGTGATTGA 2463 0.3743 MAESLLFSVAESFIGKLASVAVEEASQALGVFDNLQEIKNTVSLQWKNHELREWLKQIKRVFYDAEDVIDDFECEALQKHIINTVKCFFSNSNPLAYRLKMAHQIKHIKERFDKAAADRLKFGLQINDTDNRVVKRRELTHSYVIDSDVIGREHDKQKIIDMLLQETGDSNSLSVIPIVGIGGLGKTTLAKAVFNDKSLDETFQLKMWVCVSDDFELKNLLIKIINSASDSGSTAPNPIHPENFRNLELEQLQNHLRNMIAGKKFLLVLDDIWNEDRVKWVELKNLIQVGAEGSKVLVTTRSHSIAKMMGTNTLYILKLEGLSREDSLSVFIKWAFKEGEEKHYPELMEIGKEIVQKCGGLPLALRTLGSSLFLKVDIEEWKFIRDNDIWNLPQKEDDILPAIKLSYDQLPSYLKRCFACFSLFEKDFQFSNFHVSVLWEALGFLPPPNKGKTLNDISNQFLRELQSRSFLQDFEDFGGGASIFKLHDLVHDLALYVARDEFQLLKFHSETILENILHLSFIQNDLLGLTPIPYGLRTMLFPMGANNEAFLNALVSRCKFLRVLQLANSTYESLPRSIGKLKHLRYLNLENSKELKNLPDSVCKLQNLVNLKLDGCIKLQTLPNGIGNLIRLQQLHITTKQVNFPDKEIAKLTSLEILNVESCDNLETLLIEGIQLSNLKWLAISSCENLKSVPLHVIPHLEALGISDCHKLILPLGHDNQIPKLKFLSLQSLPQLVSLPEWLQGFVDTLNTLEIANCENLGELPEWLSILICLEKLAIRNCPKLLSLPDGAHCLPNLENLQIEGCPELCRRYQPEVGRD* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4786 820 SUPERFAMILY L domain-like 485 810 - -
Mal5g4786 820 Pfam NB-ARC domain 153 408 IPR002182 GO:0043531
Mal5g4786 820 Pfam Rx N-terminal domain 11 87 IPR041118 -
Mal5g4786 820 PRINTS Disease resistance protein signature 259 273 - -
Mal5g4786 820 PRINTS Disease resistance protein signature 674 690 - -
Mal5g4786 820 PRINTS Disease resistance protein signature 175 190 - -
Mal5g4786 820 PRINTS Disease resistance protein signature 358 372 - -
Mal5g4786 820 Gene3D - 10 106 - -
Mal5g4786 820 CDD RX-CC_like 8 111 IPR038005 -
Mal5g4786 820 Gene3D - 321 411 IPR042197 -
Mal5g4786 820 PANTHER DISEASE RESISTANCE PROTEIN RP 37 810 IPR044974 GO:0006952
Mal5g4786 820 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 131 420 IPR027417 -
Mal5g4786 820 Gene3D Ribonuclease Inhibitor 538 816 IPR032675 -
Mal5g4786 820 Gene3D - 130 316 IPR027417 -
Mal5g4786 820 PANTHER OS08G0543100 PROTEIN 37 810 - -
Mal5g4786 820 Gene3D - 413 495 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4786 Mal-Chr5 121031187 121037504 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4786 173 809 WRKY Transcription Factor Family AT5G45050 24.317 2.87e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4786 - - mtr:MTR_7g078640 1120.92