Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4771 ATGTCTGAAATGGGTAACAGAAAACGTAAAAGTGAGGAAGTTCTTAAGCTTGAACGTGAACGAAGGAACAAAATGAAACAAATGTTCACTCACCTTAATACCACTGTTCCTACTCTCTTCCCCAATGCTACGAGGGAAGTGATTATAAAAGGAACAATCGATTACATTAAGGAGCTTGAGAAGATGAAACAAAGGTTGGAGGAGTTGAAGATGAAATTACCGGTTGAAGGGAGTTTCTTGGTTCCATGTCGTAACAAAAATTGCTCTGTTACGGTTACTGTTTCTAGCAATGTGGCTTTCTTTGGGATTGAATCTGTGGCTAAACCTGGGTTGATTACTGTGATTTTGAAGGTGTTTTTGAATAACCAAGCTGAGATTTTAGCTGCTAATGTTTCTGTTAATAATGGGAATTTGATCTTGGCGATTACAGCTTTGGTTCAAAATGGTGCTGCTGATATCGAGAAGATTAAGAGAGAGATTATGAGTTTGTAA 492 0.378 MSEMGNRKRKSEEVLKLERERRNKMKQMFTHLNTTVPTLFPNATREVIIKGTIDYIKELEKMKQRLEELKMKLPVEGSFLVPCRNKNCSVTVTVSSNVAFFGIESVAKPGLITVILKVFLNNQAEILAANVSVNNGNLILAITALVQNGAADIEKIKREIMSL* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4771 163 Coils Coil 7 27 - -
Mal5g4771 163 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 9 162 - -
Mal5g4771 163 SMART finulus 15 65 IPR011598 GO:0046983
Mal5g4771 163 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 9 162 - -
Mal5g4771 163 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 9 84 IPR036638 GO:0046983
Mal5g4771 163 Pfam Helix-loop-helix DNA-binding domain 16 60 IPR011598 GO:0046983
Mal5g4771 163 Gene3D - 2 80 IPR036638 GO:0046983
Mal5g4771 163 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 9 59 IPR011598 GO:0046983
Mal5g4771 163 Coils Coil 49 76 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4771 18 72 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 41.818 8.62e-08 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal5g4771 HLH 9.4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4771 - - cam:101491921 203.756
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4771 5 120853182 120853826 Mal5g4771 5 120853182 120853826 ECH