Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4767 ATGGGGTGTGTGTTTGGGAAAGAGGGTTCAGAGAGGAAGAAAGAGATAGTGAAAGTTGTTGCTAAGGTGGAGGAGGTTGAGTGTGAGGTTCATAATGGTATGGAAAATGAGCAAGAGGGTGGAGAGGATGAGAAGAGGAGGAGACAAAGGGCAAGGAGGGAAAGGAGACAATCTTTGAAGCCTAATCCAAGATTGAGCAATCCACCAAACCATATACATGGTGAGCAAGTGGCTGCAGGGTGGCCTTCTTGGCTCTCCAAGGTTGCTGGAGAAGCCATACATGGATTGACGCCTCGAAGGGCCGATACTTTTCACAAGCTTGATAAGATTGGACAAGGAACATATAGCAATGTTTACAAAGCTATGGATACTCTAACTGGGAAAATCGTTGCATTAAAGAAGGTCCGTTTTGACAATTTGGAGCCAGAGAGCGTGAAATTCATGGCCAGAGAAATTCTGATTCTGCGTCGTCTGGATCATCCCAATGTTATCAAACTAGAAGGTTTAGTGACTTCTAGGATGTCATGTAGTTTGTATCTTGTCTTTCAATACATGGAGCATGATTTGGTTGGACTTTCTACGAGCCCTGCAATTAAGTTTACGGTGTCTCAGGTTAAATGTTACATGCATCAGCTACTTTCTGGACTGGAACACTGTCACAGCCGTAATGTGCTGCATCGTGATATAAAGGGATCAAACCTTCTTGTTGACAATGAAGGAATTCTTAGGATTGCTGATTTTGGATTAGCATCCTTCTTTGATCCTAATCACAAACACCCTATGACTAGTAGAGTGGTTACTTTATGGTATCGATCTCCCGAACTTCTTCTTGGAGCCACTGATTATGGTGTAGGAATCGACCTTTGGAGTGCTGGCTGTATTCTTGCTGAATTATTGGCTGGAAGGCCTATTATGCCTGGTCGAACAGAGGTGGAACAACTACATAAGATATTTAAGCTATGTGGTTCTCCTTCTGAAGAGTATTGGAAAAAGACAAAGCTGCCACATGCTACAATTTTTAAGCCACAACAATCATATAAGCGGTGCATAGCAGAGAAATTTGAAGATTTCCCACTATCTTCATTACCACTAATTGAGACTCTTCTAGCAATCGATCCAACCGAACGTCAAACTGCCACTGCTGCATTGCACAGCGAATTTTTTACAACACAACCTTATGCTTGTGAACCCTCTAACCTTCCAAAATATCCTCCCAGTAAGGAGATGGATACAAAGCTACGGGATGAAGAAGCTAGAAGATTAAGAGCTGGCAAAGGTAATGTTGGCGCTAAGAAATCTCGAAGTGGAAGGGGAATTCCAGTTCCGGAGGTCAATGCTGAGCTGCAAGCAAATATTGATAGATGGAGATTGGTAACGCGCGCTAATGCTAAGAGCAAGAGTGAGAAGTTTCCTCCTCCACACCAAGATGGAACTTTAGGCTATCCTTTCGGTTCTTCATGTCATATGAATCCAGTTTTTGATCCTCCTGATGTTCCATTTAGTTCCACAGACTTCTCATATCATAAAGCAAATATTCAGACCTGGTCCGGCCCATTGGTGGAACCGAGGAGAAAGAAGAACAAGGCAGGTGACCGGCACATACAATCGAAGTCATCAAAGAAGGAGATAAATAGATAG 1638 0.4304 MGCVFGKEGSERKKEIVKVVAKVEEVECEVHNGMENEQEGGEDEKRRRQRARRERRQSLKPNPRLSNPPNHIHGEQVAAGWPSWLSKVAGEAIHGLTPRRADTFHKLDKIGQGTYSNVYKAMDTLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFQYMEHDLVGLSTSPAIKFTVSQVKCYMHQLLSGLEHCHSRNVLHRDIKGSNLLVDNEGILRIADFGLASFFDPNHKHPMTSRVVTLWYRSPELLLGATDYGVGIDLWSAGCILAELLAGRPIMPGRTEVEQLHKIFKLCGSPSEEYWKKTKLPHATIFKPQQSYKRCIAEKFEDFPLSSLPLIETLLAIDPTERQTATAALHSEFFTTQPYACEPSNLPKYPPSKEMDTKLRDEEARRLRAGKGNVGAKKSRSGRGIPVPEVNAELQANIDRWRLVTRANAKSKSEKFPPPHQDGTLGYPFGSSCHMNPVFDPPDVPFSSTDFSYHKANIQTWSGPLVEPRRKKNKAGDRHIQSKSSKKEINR* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4767 545 CDD STKc_CDK9_like 104 388 - -
Mal5g4767 545 Gene3D Transferase(Phosphotransferase) domain 1 187 426 - -
Mal5g4767 545 MobiDBLite consensus disorder prediction 29 73 - -
Mal5g4767 545 PANTHER CELL DIVISION PROTEIN KINASE 47 531 - -
Mal5g4767 545 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Mal5g4767 545 ProSitePatterns Protein kinases ATP-binding region signature. 110 133 IPR017441 GO:0005524
Mal5g4767 545 MobiDBLite consensus disorder prediction 29 49 - -
Mal5g4767 545 MobiDBLite consensus disorder prediction 516 545 - -
Mal5g4767 545 Pfam Protein kinase domain 104 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g4767 545 SUPERFAMILY Protein kinase-like (PK-like) 98 393 IPR011009 -
Mal5g4767 545 PANTHER OS01G0367700 PROTEIN 47 531 - -
Mal5g4767 545 ProSiteProfiles Protein kinase domain profile. 104 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g4767 545 Gene3D Phosphorylase Kinase; domain 1 92 186 - -
Mal5g4767 545 MobiDBLite consensus disorder prediction 521 545 - -
Mal5g4767 545 SMART serkin_6 104 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g4767 545 Coils Coil 34 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4767 Mal-Chr5 120823106 120826180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4767 99 420 Core Cell Cycle Gene Families AT5G10270 50.888 3.67e-113 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mal5g4767 Pkinase 4.3e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4767 K08819 - gmx:100814207 895.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4767 5 120823106 120826180 Mal5g4767 5 120823106 120826180 ECH
Mal5g4767 5 120823106 120826180 Mal4g4296 4 120328366 120332242 PCT