Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4742 ATGGATAACTCAAATGCTTTTGTGGGTTGTGGTAGTGGTAGTGTTCATGATGAAGGCATAGAAATTGACAACTTTAATGTTGAAGATGATGATGATGATGCACGCTGGGAGCCTAAAACTGAGATGTGTTTTTCTAGCATAGATGATGTTAAATCATTTTATAGAGAATATGCTTTGAGAAAGGGTTTTGGGTGGAAGATTAGAACATCAAGGAAAGGAAATGATGGGGAGGTATGCTACTTAATTCTTGCATGCTCAAGAGATGGGTCTCAAGTGACAAAAAGTCAGTGTACGTTGAAGACACGTCCGACAAAGGGGAAAAATTGTCCTGCTAAGATTTGTATTAAGTTGAAAGAAGATGGATTGTGGTACATTAAAAAATTTGAACCAAATCATTCTCATCATACGAGCCCTAGAAAGGCAAGGTTGTTCAAGGCTAACAAGAAAATGGACTTGCATGTAAGGAGGACAATCCAAATAAATGATGATGCAGGTGTGAGGATCAACAAGACTTTTCAATCTCTTGTTAAAGATGCAGGAGGGCATGAAAATATACCATTTAATGAAAGAGATGTGAGGAATTATGTTAACAAGGAACGACGTGCAATTGGAAAAGAAGGTGATGGCAAGGCCTTGATAAGCTATTTTTATCGAATGAGGGAACAAAATCCAAATTTCTTCTATGAAATAGATTTGGATGACGATTTTCATGTAAGGAATGTGTTTTGGGCTGATGCAAGAAGTAGGGCTGCTTATGAATATTTTGGAGATGTTGTAACTTTCGACACAACATATTTGACCAATAAATATGATATGCCTTTTGCTGTGTTTGTTGGTGTGAATCACCATGGTCAATCAACATTACTTGGATGTGGGCTGCTATCAAGAGAAGACACAGATTCATTTGTATGGCTTTTTAATTCATGGCTTCGTTGTATGCTAGGAAAGCCCCCTGTTGGTATTGTGACTGACCAATGTAAGGCAATGCAAAATGCAATTGAGATAGTCTTCCCTACAACTCGCCACAGGTTGTGTTTATGGCATATAATGACAAAAATTCCCGAAAAACTCAGCGGATATGGTGAATATAAAAGGATCAAGTCTGCAATGAAAGAAGCGGTTTATGATACGTTCACAACAGGTGTTTTTGAAGAGAAATGGTGTTCCTTCATCGAAAAATTTGAGCTTCAACAGAATCCTTGGTTGAATGGGTTGTATAATGAGCATCATAGATGGGCACCAACCTTGTTAAGAAAATATTTTTGGGCCGGTATGTCAACAACTCAGCGAAGTGAGAGTATACATGCTTTCTTTGATGGTTATATCAATTCAATGACAAGTCTACATCAATTTGTAAAACAATATGATAATGCTCTCCGAAGTCGAGCAGAAAAAGAATTTGAAGCAGATTTTAACTCGATGGATACTACAATTTCTTGCGGGTCAAACTCGTCAATTGAAAAGCAATTCCAAGTTGAATTTAGATCTAAAGTGAATTGTGCTTCCTCATTGAACATTGTGGAGGGCTACTTTGCCACTTATCATGTGTTGGAGGACGTGTTAGTTGGAGATAGACCAAAAGAACATGTATTTAAAGTTGTGTTTAATCGAGAAAACCATGATGTCAGTTGTGAATGCTCATTGTTTGAATTTAAAGGTATTTTGTGTCGGCATGTGTTATGTAAGTATGTTTTAACTAGATGGAAGAAAAATATTAAAAGGAAGCATACATATATTAAGAGCAGTTATTGTGTTACACAATTAAAGCCACAGATGGACAGGTTTGACAAGTTGTGCAAGCATTTCTACGAGGTTGCTGAAGTAGCAGCAGAGTTTGAAGACAGATCTGCGGACCTTCATACAATATTACATCAATTTGCTTCTGATTCACCTACCAGGAACGCTACAACTGAAAATGTTAAAGTAAGTTTCAATGGGGACTCAAATCCAAACGTTGGTACTGAAATTCACAGTCCATTGCGGGTCAAGCGTAAAGGCCGCCCTCCATCAAAAAGAAAAATATCTGCAATTGAAAAAGTTGCTAACAGGCCAAGGAAACGACCCAAACAGAGTGATGACAAAGGGACTAATGTATGTTTTATTTTATTTAGAAGTTTTGTAATCACCATGTATATATGGATATTGCATCTTAATTCTTTGTTTGTCCAAATTTGTAGGACACCAATACTGAAAGAGTGA 2199 0.3706 MDNSNAFVGCGSGSVHDEGIEIDNFNVEDDDDDARWEPKTEMCFSSIDDVKSFYREYALRKGFGWKIRTSRKGNDGEVCYLILACSRDGSQVTKSQCTLKTRPTKGKNCPAKICIKLKEDGLWYIKKFEPNHSHHTSPRKARLFKANKKMDLHVRRTIQINDDAGVRINKTFQSLVKDAGGHENIPFNERDVRNYVNKERRAIGKEGDGKALISYFYRMREQNPNFFYEIDLDDDFHVRNVFWADARSRAAYEYFGDVVTFDTTYLTNKYDMPFAVFVGVNHHGQSTLLGCGLLSREDTDSFVWLFNSWLRCMLGKPPVGIVTDQCKAMQNAIEIVFPTTRHRLCLWHIMTKIPEKLSGYGEYKRIKSAMKEAVYDTFTTGVFEEKWCSFIEKFELQQNPWLNGLYNEHHRWAPTLLRKYFWAGMSTTQRSESIHAFFDGYINSMTSLHQFVKQYDNALRSRAEKEFEADFNSMDTTISCGSNSSIEKQFQVEFRSKVNCASSLNIVEGYFATYHVLEDVLVGDRPKEHVFKVVFNRENHDVSCECSLFEFKGILCRHVLCKYVLTRWKKNIKRKHTYIKSSYCVTQLKPQMDRFDKLCKHFYEVAEVAAEFEDRSADLHTILHQFASDSPTRNATTENVKVSFNGDSNPNVGTEIHSPLRVKRKGRPPSKRKISAIEKVANRPRKRPKQSDDKGTNVCFILFRSFVITMYIWILHLNSLFVQICRTPILKE* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4742 732 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 26 608 IPR031052 GO:0006355
Mal5g4742 732 Pfam SWIM zinc finger 543 560 IPR007527 GO:0008270
Mal5g4742 732 Pfam FAR1 DNA-binding domain 52 136 IPR004330 -
Mal5g4742 732 ProSiteProfiles Zinc finger SWIM-type profile. 531 567 IPR007527 GO:0008270
Mal5g4742 732 PANTHER OS03G0843700 PROTEIN 26 608 - -
Mal5g4742 732 SMART 26again6 542 571 IPR006564 GO:0008270
Mal5g4742 732 Pfam MULE transposase domain 258 351 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4742 Mal-Chr5 120600389 120602657 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal5g4742 MULE 7e-33 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4742 - - gmx:102667848 740.725