Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4735 ATGGGTTGTGTTCATGGTAAATGTTGCTGTGCGAAATCTTCGTCTGGTGGCAACTCTAGAAAACTTGGTTTTCATCATAGCCATAGGAAGAACATACAAGCTCAGAGAGTACTGAAAAATGTTTCTGTTCCTTCCCACAACTTTGTTTTGGGATATACGTTTCTTACACTCCGAGGATACTACCCTGATTCGCTGGATAAACAAAACCAAGATAGTTTTTGCATTAGGACGGAAATTCAAGGTAACCCGAATATCCATTTCTTTGGTGTTTTTGATGGACATGGTCAATATGGTAGTCAGTGTTCGAACTTTGTTAGGGATAGGTTGGTAGAAAAATTATCTAATGACCCTGCATTGATGGAGGATCCTGTTCGAGCTTACAATTCTGCGTTCTCGGCGACAAATCATGAATTGCATACTAGTGACATTGATGATTCTATGAGTGGTACAACGGCAATTACGGTGCTTGTTATTGGAGACACCCTTTATGTTGCTAATGTTGGTGATTCGAGAGCTGCTCTAGCTGTTAAGGATGGGAATCGAATTATTGCAGAGGACTTGTCCTCTGATCAGACACCATTTCGGAGAGATGAATATGAGAGAGTGAAACTTTGTGGAGCAAGGGTGTTGAGTGTTGATCAAGTGGAAGGGGTTAAGGATCCAAATATCCAGCATTGGGGTAACGAAGAGAGTTGGGATGGCGATCCTCCGAGATTGTGGCTTCCAAATGGGATGTTTCCTGGAACTGCATTTACAAGGAGTTTAGGGGATAGATTGGCGGAGACAATTGGCGTGGTTGCGACTCCAGAGGTGTCAATAGTTCGGCTTACACCTAATCATCTCTTCTTTATTGTTGCTAGTGATGGCATATTTGAATTCTTGTCAAGCCAAACTGTTGTTGATATGTCAAGCACATCTGGAGTTGAATTAAGTGAGGTCAACGTATCTGCTACCACTGAATTCGATGTTTATCATTCTGTTAGTTTCTCTGATTCACAATCCTGCCAGTCAAAGATCAGTTGA 1023 0.4184 MGCVHGKCCCAKSSSGGNSRKLGFHHSHRKNIQAQRVLKNVSVPSHNFVLGYTFLTLRGYYPDSLDKQNQDSFCIRTEIQGNPNIHFFGVFDGHGQYGSQCSNFVRDRLVEKLSNDPALMEDPVRAYNSAFSATNHELHTSDIDDSMSGTTAITVLVIGDTLYVANVGDSRAALAVKDGNRIIAEDLSSDQTPFRRDEYERVKLCGARVLSVDQVEGVKDPNIQHWGNEESWDGDPPRLWLPNGMFPGTAFTRSLGDRLAETIGVVATPEVSIVRLTPNHLFFIVASDGIFEFLSSQTVVDMSSTSGVELSEVNVSATTEFDVYHSVSFSDSQSCQSKIS* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4735 340 Gene3D - 60 322 IPR036457 -
Mal5g4735 340 CDD PP2Cc 67 302 IPR001932 -
Mal5g4735 340 SUPERFAMILY PP2C-like 41 305 IPR036457 -
Mal5g4735 340 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 32 311 - -
Mal5g4735 340 SMART PP2C_4 47 338 IPR001932 -
Mal5g4735 340 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 32 311 - -
Mal5g4735 340 ProSitePatterns PPM-type phosphatase domain signature. 87 95 IPR000222 GO:0043169
Mal5g4735 340 Pfam Protein phosphatase 2C 74 302 IPR001932 -
Mal5g4735 340 ProSiteProfiles PPM-type phosphatase domain profile. 51 340 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4735 Mal-Chr5 120469207 120471597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4735 1 302 PP2C-type Phosphatase Gene Family AT3G06270 68.647 5.69e-152 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4735 - - gmx:100785383 514.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4735 5 120469207 120471597 Mal5g4735 5 120469207 120471597 ECH
Mal5g4735 5 120469207 120471597 Mal4g4258 4 119666058 119669067 PCT