Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4730 ATGGCTACCTCCCCTTCAACCACCACCCCTCCTCTTCTCCCCGATCCCCCCACCGCCGTCCCCCTCCCCCTCGCTCTCTCCGCTCCACTCCCTATCCCTCCCTCCACCCGCCGTCTCCCTCCTCCCTGCTGGTCCCCCGAAGAAACCCTAGCTCTCATCGACTCCTACCGCGACAAATGGTACTCTCTTGGCCGCGGTAACCTCAAAGCCACTCACTGGCAAGAAGTCGCTGACGCTGTTTCGAATCGTTGTCCTAACGCTTCTCCGGCCAAAACTCCCGTTCAATGCCGTCACAAGATGGAGAAGCTTCGGAAACGTTATCGTACTGAGATTCAACGTGCTCGCTCGCTTCCGCATTCCAGATTCAACTCCGCTTGGGTTCACTTTAAGCTTATGGATTCCATGGAGAAAGGTCCTTCTACGGTTAAATCTGAAAACAACGATTCTGATAGCGCTGATGATGATGATGAAGATGATCATGATCAAGATCTGTATTTGGATATCAAAAACGGTCACGGATCTAATACTAGAAGTATTAATAAGCTGTGTAAGAACGGTTTCGGTGGCGGTATTGGTGGTGGTTTCAGTGGCGGAATTGGTGGTGGTTTCAGTGGCGGTAGCGGTGGTGGTGGTAGTGGTAGTGGTGTTGGTGGAGGGTTTAGAATTAGGTATCCGCCGGCACAACCTGAATCGAAATTTTTTTCTGATCAGAAATATAACCCTAACCCTAATCTGAATCACAGCTACGGGACGCCAACGCCGCCGACAACCGCGGCAAAGGGGTTGGGGAACAAGAGGGAGAGAGATCCATTGGGAGAAGTTGTGTCTGCGATTAAGTTATTAGGAGATGGGTTTGTGAGGATGGAGCAAAAGAAGATGGAGATGGCGAGGGAGATTGAAACTATGCGGATGGAGATGGAAATGAAGCGTACTGAGATGATTCTTGAATCACAACAGCGAATCGTGGAGGCGTTTGCGAAAGCCGTTTCCGATGACAGCAACAACAACCACAACATGAAGCCTATTAATAAGAGAATTCCCTCACCACAACAACAATAA 1059 0.5014 MATSPSTTTPPLLPDPPTAVPLPLALSAPLPIPPSTRRLPPPCWSPEETLALIDSYRDKWYSLGRGNLKATHWQEVADAVSNRCPNASPAKTPVQCRHKMEKLRKRYRTEIQRARSLPHSRFNSAWVHFKLMDSMEKGPSTVKSENNDSDSADDDDEDDHDQDLYLDIKNGHGSNTRSINKLCKNGFGGGIGGGFSGGIGGGFSGGSGGGGSGSGVGGGFRIRYPPAQPESKFFSDQKYNPNPNLNHSYGTPTPPTTAAKGLGNKRERDPLGEVVSAIKLLGDGFVRMEQKKMEMAREIETMRMEMEMKRTEMILESQQRIVEAFAKAVSDDSNNNHNMKPINKRIPSPQQQ* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4730 352 MobiDBLite consensus disorder prediction 1 20 - -
Mal5g4730 352 Gene3D - 44 109 - -
Mal5g4730 352 MobiDBLite consensus disorder prediction 137 171 - -
Mal5g4730 352 SMART 118neu2 51 140 IPR006578 -
Mal5g4730 352 Pfam Myb/SANT-like DNA-binding domain 42 135 IPR044822 -
Mal5g4730 352 MobiDBLite consensus disorder prediction 329 352 - -
Mal5g4730 352 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 1 341 IPR044823 -
Mal5g4730 352 MobiDBLite consensus disorder prediction 244 268 - -
Mal5g4730 352 ProSiteProfiles Myb-like domain profile. 44 104 IPR001005 -
Mal5g4730 352 Coils Coil 285 305 - -
Mal5g4730 352 MobiDBLite consensus disorder prediction 244 258 - -
Mal5g4730 352 PANTHER TRANSCRIPTION FACTOR 1 341 - -
Mal5g4730 352 Coils Coil 97 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4730 Mal-Chr5 120396701 120397759 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4730 43 135 Trihelix Transcription Factor Family AT3G14180 36.559 1.02e-15 76.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mal5g4730 Myb_DNA-bind_4 5.6e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4730 - - vun:114179736 343.969