Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4691 ATGACAATTGGTAGTTTATGCAAGCCCTGTATTGTATTGCTTCCGCGGTCTGGAAATTTGAAGAAGCAATCTGTGTCGGAACTAACATTTTCAACTCCAACGAGCACTCTTTCACTTTCAATTTATGCATCCACCACTCTTCGCTATGCACCATGGTTTTGCTCCACGTCTTCTGTTGAATGGCTTCCTCTCTCAATTTCTGAAGTGCATTTAACGAAAGTGTTTTCATTGTTCGGTGAAGTTACTCAAGTCAAACTTTTGATAGATAAAGAAACTGGTCAGCCTCTAGGATTTGCATATATTTGGTTTGTCGAGGAAGAGTCTGCAAAATTGGCTGCAAAAGTGATGAATGGAAAGTTTTTTGATGGCAGGTTTATTTATGTTACAATTGCAAAGCCTGGATCATCAAAAAGTTTGAAGAGAAGAACAGCCTACAAATTTTAA 444 0.3829 MTIGSLCKPCIVLLPRSGNLKKQSVSELTFSTPTSTLSLSIYASTTLRYAPWFCSTSSVEWLPLSISEVHLTKVFSLFGEVTQVKLLIDKETGQPLGFAYIWFVEEESAKLAAKVMNGKFFDGRFIYVTIAKPGSSKSLKRRTAYKF* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4691 147 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 59 126 IPR000504 GO:0003723
Mal5g4691 147 SUPERFAMILY RNA-binding domain, RBD 62 139 IPR035979 GO:0003676
Mal5g4691 147 PANTHER RNA-BINDING MOTIF PROTEIN, X-LINKED 2 48 147 - -
Mal5g4691 147 Gene3D - 55 144 IPR012677 -
Mal5g4691 147 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 55 133 IPR000504 GO:0003723
Mal5g4691 147 SMART rrm1_1 62 129 IPR000504 GO:0003723
Mal5g4691 147 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 4, MITOCHONDRIAL ISOFORM X1 48 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4691 Mal-Chr5 119853610 119855279 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4691 64 145 Eukaryotic Initiation Factors Gene Family AT2G36660 31.707 2.21e-08 50.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4691 5 119853610 119855279 Mal5g4691 5 119853610 119855279 ECH