Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4690 ATGATGAATATATTTTCAGTGTCGGGTGCTGTTGCTTGCAAGCCCCTAGTGAGTTTCCAAACGCCACTAATGGATAACAATTCATTGTTTCAACAACATCGTAACAAGGAAAAAGTTGTTGTGATCACGGGTGCCACCGGAACCGGGAAATCCAAGTTGGCAATAGATATAGCAACACATTTTCCACCGGCAGAGATTATCAACTCCGACAAAATGCAAGTTTACAAAGGCCTTGACATAACAACAAACAAAGTTACAGAAGAAGAGTGTCGTGGGGTCCACCATCATTTACTTGGAACTGTTGATCCTAATTCAGATTTCACATCCAAGGATTTTTGTGAACACGCGACGATGACTATTGGTTCCATCGTCGCGAGAGATGGGTTACCTATTATAGCAGGTGGATCAAATTCGTACATTGAAGCTTTGGTTAATCATCATCATGAGTTTCGTACAAGGTACGAATGTTGTTTTCTTTGGGTTGATGTTTCACGTCCCGTGCTTCAATCATCTTTATCCGCACGTGTGGATCGGATGATTGAAGCAGGACAAGTTAACGAAGTTCGTGAAATTTTCAACCAAGAAGATTATGATTACACAAGAGGGATTAGAAGAGCCATTGGTGTACCTGAATTCGACGAACTTTTTAGAGCTGAATTAGAAGGAAAAGTTGATGAAAGAACAATGAAAAAGCTTCTAGAAGTTGCTATTGATGCTCTTAAAATAAACAATATTAAGCTTGCAAATAAACAAGTTCAGAAGATTCATAGGCTTTATGGTATGTGGAAAAAGAACATGCACCGTCTTGATGCTACGGAGGTGGTGCTTAAGGAGAAAACTTGGGAAGATTGTGTTTTGGCAAAGAGTCTGAGGATTGTTCACAAGTTTCTATACGAGGATTGTTCACGTGTTACAGTTGGTGGTAGTCGTGGTGGTGGTGGTATTGTGCCTGCAAATATTGGTTCTGCCACGGTGGCAGCAGGGGTAACCCATTAG 996 0.4096 MMNIFSVSGAVACKPLVSFQTPLMDNNSLFQQHRNKEKVVVITGATGTGKSKLAIDIATHFPPAEIINSDKMQVYKGLDITTNKVTEEECRGVHHHLLGTVDPNSDFTSKDFCEHATMTIGSIVARDGLPIIAGGSNSYIEALVNHHHEFRTRYECCFLWVDVSRPVLQSSLSARVDRMIEAGQVNEVREIFNQEDYDYTRGIRRAIGVPEFDELFRAELEGKVDERTMKKLLEVAIDALKINNIKLANKQVQKIHRLYGMWKKNMHRLDATEVVLKEKTWEDCVLAKSLRIVHKFLYEDCSRVTVGGSRGGGGIVPANIGSATVAAGVTH* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4690 331 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 26 302 IPR039657 -
Mal5g4690 331 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 200 IPR027417 -
Mal5g4690 331 Gene3D - 36 297 IPR027417 -
Mal5g4690 331 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 165 266 - -
Mal5g4690 331 Pfam IPP transferase 73 147 - -
Mal5g4690 331 Pfam IPP transferase 149 253 - -
Mal5g4690 331 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 26 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4690 Mal-Chr5 119841900 119842895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4690 152 297 C2H2 Transcription Factor Family AT2G27760 30.636 5.12e-17 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4690 K10760 - gmx:100778430 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4690 5 119841900 119842895 Mal5g4690 5 119841900 119842895 ECH
Mal5g4690 5 119841900 119842895 Mal4g4204 4 118904394 118905416 PCT