Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4683 ATGGGTGGTTCATGGAGTAATAACAGTAATAACAGAAACATAAGAAGAAGACATAGTTATCATGAACACTATCCACCACCTCCTTACTATTATCATTACTCTTCTCAGCCTCAGCCTCTTATGCCACAGCCTCAGCCTCAAGGTTACTTTCCTCCTCCTCCTCCTCATCAATACTACTCAAATGGATACACTCCTTCCAATTCCATGCTGCCTCAGCCTCAACAACCTTTCTACGCAACAACAAATACTCAACCTCTTGATGTAGATGTAAATGTTGTTCAACCACCACCACCAGCTCCTTACACTGACCATGAAACTGCAAAGAAGGTAAGGAATGATGTGAACTTGCATAAACACACTCTGCAGCTCTACCAGGATCCTAACAATCCCGATCACCGCTTGATTTCCTTTGTTTTTGATGCTCTCTTTCCTGGCAGAATTACAATCTTCTACTTAGCCAGAGAAGAACAACATCAATGTAGGTTTATTCCTCTATTTCCCGAAGCGTTTGAGCCAATCACATTCCCCTTCCAAAAAGGGGTAGGCCAGAAATTTTGTCAGCCTTCAGGAACAGGCATTGATTTAGGTTTCTTTGAGTTAGATGATCTTTCAAATCCTTCACCTGAAGAAGACATATTTCCCCTCGTAATATGCGCTGAAACAACGCCTTTGGAAGATCATGATACTCCTGGTAGTTCCTTGGTAGATGCATCCCCTCACATGCAAATAACTCAAGCTGTCCTGGAGAAAACCGACGGGGCTGGTCCTTTCCAGGTTAAAGTAGTTAGACAGATTCTATGGATCGATCAAGTTCGTTATGAGCTGAGAGAGTTATACGGAATTTGTAACTCAACAGCCCCTGATTTCGATCGTAATGATACTGGAAAGGAGTGTGTAATATGCATGACAGAACCAAAGGATACTGCTGTCTTACCTTGCCGACACATGTGTATGTGCAGTGAGTGTGCAAAAGCTTTGCGGGTTCAATCAAACAATTGCCCTATATGCCGCCAACCTATTGAGCAACTTATAGAGATCAAGATAAACAATGATGAACAATAA 1062 0.4228 MGGSWSNNSNNRNIRRRHSYHEHYPPPPYYYHYSSQPQPLMPQPQPQGYFPPPPPHQYYSNGYTPSNSMLPQPQQPFYATTNTQPLDVDVNVVQPPPPAPYTDHETAKKVRNDVNLHKHTLQLYQDPNNPDHRLISFVFDALFPGRITIFYLAREEQHQCRFIPLFPEAFEPITFPFQKGVGQKFCQPSGTGIDLGFFELDDLSNPSPEEDIFPLVICAETTPLEDHDTPGSSLVDASPHMQITQAVLEKTDGAGPFQVKVVRQILWIDQVRYELRELYGICNSTAPDFDRNDTGKECVICMTEPKDTAVLPCRHMCMCSECAKALRVQSNNCPICRQPIEQLIEIKINNDEQ* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4683 353 MobiDBLite consensus disorder prediction 19 80 - -
Mal5g4683 353 PANTHER AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED 1 352 - -
Mal5g4683 353 PANTHER MAHOGUNIN 1 352 IPR045194 GO:0061630
Mal5g4683 353 PIRSF SBP1_RNase_bind 20 132 IPR017066 -
Mal5g4683 353 PIRSF SBP1_RNase_bind 279 348 IPR017066 -
Mal5g4683 353 MobiDBLite consensus disorder prediction 39 59 - -
Mal5g4683 353 CDD mRING-HC-C3HC5_MGRN1_like---blasttree 297 337 IPR045195 -
Mal5g4683 353 ProSiteProfiles Zinc finger RING-type profile. 298 337 IPR001841 -
Mal5g4683 353 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 283 347 IPR013083 -
Mal5g4683 353 SMART ring_2 298 336 IPR001841 -
Mal5g4683 353 Pfam Zinc finger, C3HC4 type (RING finger) 296 342 - -
Mal5g4683 353 MobiDBLite consensus disorder prediction 60 80 - -
Mal5g4683 353 SUPERFAMILY RING/U-box 297 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4683 Mal-Chr5 119771616 119773468 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4683 101 353 C3H Transcription Factor Family AT3G06140 61.569 5.03e-101 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4683 - - gmx:102665712 436.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4683 5 119771616 119773468 Mal5g4683 5 119771616 119773468 ECH