Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4680 ATGGCGACAACGTCAGAAGGTATGAATCAATCCCTCGAATCGTTGAAGAAACAAAGAGAACTAATTTTGAAGGCCGTGTGGCTTTTGAAAAAAGCCCTAATGGACAATATTCCATGTGAAATTGATGAAGTTGTGCTTTTTAATAAATCCCTCAAAGAGGATAATATTCCATGCAAAATTGATGAGGGTTTGTTTTTGGGTTCGGTTGATTCTGCTACGAACAAGGTTGATTTGAAAAATGTTAATGTTACTCACATTTTGACTGTGGCTTGGAAACTTCCACCTGCATATCCTGCCGATTTCGTCTATAAAGTTATAGCTGTTGCTGACAGAGTAAATACCAACTTAAAACAACACTTCAATGAATGTTTTGATTTTATCGACGAAGCCAAAAGAAATGGTGGAAATGTTTTGGTTCACTGCAAGATGGGAATATCGAGGAGTGTGACTATTGTTGTGGCATATTTGATGAAGTCTCGTGGAATGAGCTTATCTGAAGCTCAGCAACATGTAAAGAACAAAAGATCACAAGCATCTCCAAATCGTGGTTTCATTCGTCAGCTGAAAGACTTTGAGAAATCTCTTGAAGGTGAAAACTGCATTAATCTTAAATATCGTTAA 621 0.3704 MATTSEGMNQSLESLKKQRELILKAVWLLKKALMDNIPCEIDEVVLFNKSLKEDNIPCKIDEGLFLGSVDSATNKVDLKNVNVTHILTVAWKLPPAYPADFVYKVIAVADRVNTNLKQHFNECFDFIDEAKRNGGNVLVHCKMGISRSVTIVVAYLMKSRGMSLSEAQQHVKNKRSQASPNRGFIRQLKDFEKSLEGENCINLKYR* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4680 206 Gene3D Protein tyrosine phosphatase superfamily 49 203 IPR029021 -
Mal5g4680 206 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 45 198 - -
Mal5g4680 206 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 118 175 IPR000387 GO:0016311|GO:0016791
Mal5g4680 206 SMART dsp_5 56 194 IPR020422 GO:0006470|GO:0008138
Mal5g4680 206 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 1B 45 198 - -
Mal5g4680 206 CDD DSP 57 190 - -
Mal5g4680 206 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 55 198 IPR029021 -
Mal5g4680 206 Pfam Dual specificity phosphatase, catalytic domain 64 193 IPR000340 GO:0008138|GO:0016311
Mal5g4680 206 ProSiteProfiles Dual specificity protein phosphatase domain profile. 56 197 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4680 Mal-Chr5 119727193 119729101 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4680 59 197 Protein tyrosine phosphatase (PTP) family AT3G06110 60.432 2.72e-58 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4680 - - aprc:113847529 225.713