Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4666 ATGTCAGGTTGGGACGAAGGAGGTGTATACTACAGCGACCAAGCCCACTCCTGGGACGACGGCCGCGGTGGCGAATCGGAAGCCGCCATCTCCAACCACACCATTCTCCAAAAATTCAAAGAATTCATCCGTAACTTCGAGACCGGTAACAATGTTTTCCCTTACAGAGAAAGCCTCCTCCATAACCTTAAGTTTCTTCTCGTCGATATGGAAGATCTTGACTCTTTTGACCCTGATCTTCCCTCTAAACTCCGATCTGCTCCTGCCGATATTCTCCCCCTGTTTGAAACTGCGGCGGCGCAGGTTTTAGTTAATTTGAAGACTAAAGTTGCTGGTGATACTGGTGTTATGGAAGATGCTGCTCCTGGTGATGTTCAGATTCTTCTTACTTCTAAGGAGGATTCTGTTTCCATGAGATCGCTTGGGGCTCAATACATATCAAAGCTTGTTAAAATTGCTGGAATAACAATTGCTGCGTCCAGGACTAAGGCAAAAGCAACATATGTGACCTTGATATGTAAGAATTGTAAGAAGGGGAAGCAGGTTCCTTGTCGGCCCGGACTTGGGGGAGCGGTTGTTCCTCGTTCATGTGATCATGTTCCTCAGCCTGGAGAAGAACCTTGTCCAATAGATCCATGGCTTATTGTTCCTGACAAGAGCAAGTATGTTGATCAACAAACCTTGAAGTTGCAAGAAAATCCGGAGGATGTTCCAACTGGAGAGCTTCCTAGAAACCTGCTTCTTTCTGTTGATCGACATCTTGTTCAAACAGTAGTTCCTGGCTCAAGATTAACAATTGTTGGAATCTATAGTATTTTTCAGGCTTCCAACTCTTCTACATCCAACAAAGGAGCAGTTGCAGTTAGACAGCCTTATATTAGGGTTGTGGGAATAGAAGATGGAAATGAAGCTAAGTCTCGAGGTCCTACTGCGTTTACAAATGAAGAAATTGAAGGGTTCAAAAAATTTGCAGCTGAGCATGATGTATACAAAAATATATGCTCCAAGATTGCTCCGTCTATATTTGGGCATGATGACGTCAAAAAGGCTATGGCCTGTCTTTTATTTGGAGGGTCAAGAAAGCATTTGCCAGATGGGGTGAGATTAAGAGGTGATATCAATGTGTTACTTCTCGGGGATCCATCTACAGCAAAGTCGCAGTTTCTCAAGTTTGTTGAAAAGACTGCTCCTATTGCTGTTTATACTTCTGGAAAAGGCTCATCAGCTGCTGGCCTCACAGCTTCTGTAATCCAAGATAGCAGCACTCGTGAGTTTTATCTCGAAGGAGGAGCCATGGTCTTGGCAGATGGAGGTGTTGTCTGCATTGATGAGTTTGACAAGATGAGACCAGAAGATAGGGTTGCCATTCATGAAGCCATGGAACAGCAAACTATATCCATAGCCAAAGCAGGAATAACAACCGTTCTTAATTCAAGGACTTCTGTTCTTGCTGCTGCCAATCCCCCATCAGGGCGTTATGATGACCTTAAGACTACACAGGACAATATTGATTTACAGACAACTATTCTTTCTAGGTTTGATTTAATCTTCATAGTGAAAGACATCAGAATGTACGAACAAGATAAGATAATAGCCAGTCATATCATAAAGGTTCATTCATCAGCTAGTGCAACGAGGGGTGAGAATAGGACTCCCGTTTCCAAGGAGGAAAATTGGCTGAAGAGGTACTTGCAATATTGTCGAACTGAATGCCACCCTCGTCTATCGGAAGCTGCAGCAACATTGCTGCAAAATAATTATGTGAATATCAGACAGGATATGAGGCAGCAAGCAAATGAAACTGGAGAAGCTGCTGCAATACCAATTACTGTAAGGCAGCTGGAAGCTATTGTAAGGTTGAGTGAGTCACTTGCAAAGATGAAACTATCTAATCATGCTACCGAGGACAATGTGCAAGAAGCCATAAGGCTTTTCACCGTTTCTACAATGGATGCAGCTAAGTCAGGAATAAACCAACAAATAAATCTCTCACCTGAAATGGCCCGTGAGATACAGCAAGCAGAAGTTCAGATAAAGAGAAGAATCGGAATTGGGAATCACATATCAGAAAGAAGACTGATTGATGATCTCGGCAGAATGGGGATGAATGAATCTATTGTGAGAAGAGCCCTTCTAATCATGCACCAGAGAAACGAAGTAGAGTACAAGCGAGAAAGACGTGTTGTATTTCGGAAAGCATAA 2202 0.431 MSGWDEGGVYYSDQAHSWDDGRGGESEAAISNHTILQKFKEFIRNFETGNNVFPYRESLLHNLKFLLVDMEDLDSFDPDLPSKLRSAPADILPLFETAAAQVLVNLKTKVAGDTGVMEDAAPGDVQILLTSKEDSVSMRSLGAQYISKLVKIAGITIAASRTKAKATYVTLICKNCKKGKQVPCRPGLGGAVVPRSCDHVPQPGEEPCPIDPWLIVPDKSKYVDQQTLKLQENPEDVPTGELPRNLLLSVDRHLVQTVVPGSRLTIVGIYSIFQASNSSTSNKGAVAVRQPYIRVVGIEDGNEAKSRGPTAFTNEEIEGFKKFAAEHDVYKNICSKIAPSIFGHDDVKKAMACLLFGGSRKHLPDGVRLRGDINVLLLGDPSTAKSQFLKFVEKTAPIAVYTSGKGSSAAGLTASVIQDSSTREFYLEGGAMVLADGGVVCIDEFDKMRPEDRVAIHEAMEQQTISIAKAGITTVLNSRTSVLAAANPPSGRYDDLKTTQDNIDLQTTILSRFDLIFIVKDIRMYEQDKIIASHIIKVHSSASATRGENRTPVSKEENWLKRYLQYCRTECHPRLSEAAATLLQNNYVNIRQDMRQQANETGEAAAIPITVRQLEAIVRLSESLAKMKLSNHATEDNVQEAIRLFTVSTMDAAKSGINQQINLSPEMAREIQQAEVQIKRRIGIGNHISERRLIDDLGRMGMNESIVRRALLIMHQRNEVEYKRERRVVFRKA* 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4666 733 Gene3D - 30 115 - -
Mal5g4666 733 ProSiteProfiles MCM family domain profile. 329 535 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mal5g4666 733 Gene3D - 310 669 IPR027417 -
Mal5g4666 733 PRINTS Mini-chromosome maintenance (MCM) protein 5 signature 289 301 IPR008048 GO:0003688|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Mal5g4666 733 PRINTS Mini-chromosome maintenance (MCM) protein 5 signature 567 582 IPR008048 GO:0003688|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Mal5g4666 733 PRINTS Mini-chromosome maintenance (MCM) protein 5 signature 643 660 IPR008048 GO:0003688|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Mal5g4666 733 PRINTS Mini-chromosome maintenance (MCM) protein 5 signature 139 154 IPR008048 GO:0003688|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Mal5g4666 733 PRINTS Mini-chromosome maintenance (MCM) protein 5 signature 165 177 IPR008048 GO:0003688|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Mal5g4666 733 Pfam MCM AAA-lid domain 559 648 IPR041562 -
Mal5g4666 733 Pfam MCM OB domain 138 273 IPR033762 -
Mal5g4666 733 Gene3D - 138 273 IPR012340 -
Mal5g4666 733 Pfam MCM N-terminal domain 37 108 IPR027925 -
Mal5g4666 733 Gene3D - 165 223 - -
Mal5g4666 733 ProSitePatterns MCM family signature. 438 446 IPR018525 GO:0003677|GO:0005524|GO:0006260
Mal5g4666 733 SUPERFAMILY Nucleic acid-binding proteins 38 295 IPR012340 -
Mal5g4666 733 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 60 677 IPR031327 GO:0003677|GO:0005524|GO:0032508
Mal5g4666 733 CDD MCM5 332 648 - -
Mal5g4666 733 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 339 649 IPR027417 -
Mal5g4666 733 SMART mcm 134 650 IPR031327 GO:0003677|GO:0005524|GO:0032508
Mal5g4666 733 Pfam MCM P-loop domain 317 539 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mal5g4666 733 PRINTS Mini-chromosome maintenance (MCM) protein family signature 430 444 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mal5g4666 733 PRINTS Mini-chromosome maintenance (MCM) protein family signature 482 494 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mal5g4666 733 PRINTS Mini-chromosome maintenance (MCM) protein family signature 509 517 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mal5g4666 733 PRINTS Mini-chromosome maintenance (MCM) protein family signature 370 385 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mal5g4666 733 PRINTS Mini-chromosome maintenance (MCM) protein family signature 458 471 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mal5g4666 733 PANTHER DNA REPLICATION LICENSING FACTOR MCM5 60 677 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4666 Mal-Chr5 119469129 119475020 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4666 1 733 Core DNA Replication Machinery Family AT2G07690 77.763 0.0 1172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4666 K02209 - gmx:100779483 1286.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4666 5 119469129 119475020 Mal5g4666 5 119469129 119475020 ECH