Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4642 ATGTGTGTGCAAGAGGGTGAACAAGTTGATCAAGATAATAATAATATGGAGAAACTTGATAACAGAAGAATTTCATGGCCTTTGCATTGTGATCTCTTGCATGCTCAGATGGATAATTCAGAAAATGACTCTTCTTGTAGAATTTCCAGTGACCAGATCAGTGCTGTTAATTCATTTCCTCTGGAAAGCATTTGTGAGGATGCAGAGATTGCAGATAAAAAACAGAACCTGATAAATTTTGTTCCTGCACTTCGGTCGGGTGAGTGGTCTGATATTGGAGGTCGCCCTTACATGGAGGATACTCACATATGCATTGAAGACTTGGCAAAGAAATTTGGTTACGATGTTGTCTGCAACGAAGCTATTTCCTTTTATGGTGTATTTGACGGACATGGAGGGAAGAGTGCTGCGCAATTTGTTCGTGATCATCTGCCGAGGGTGATTGTTGAGGATGCTGACTTCCCTCTTGAACTTGAGAAGGTGGTCACAAGGTCATTTTTGGAGACTGATTCAGAGTTTGCAAAAACATGCTCTATTGAGTCTTCCCTATCTTCTGGTACAACTGCTTTGACTGCAATTATATTTGGAAGGTCTTTACTTGTGGCCAATGCCGGGGACTGCAGAGCTGTTTTGTCCCGAGCTGGAGGGGTAATAGAATTGTCCAAAGATCACAGGCCTTTATGCATGAAAGAAAGGATGAGGATTGAGTCGCTTGGCGGATTTGTTGATGATGGTTACTTGAATGGACAGCTAGGCGTGACGCGTGCTCTAGGTAACTGGCATCTTGAAGGAATGAAGGAAATGAGTGGAAGAAGTGGACCATTGAGTGCTGAGCCGGAACTTAAATTGATGACATTGACAAAAGATGACGAGTTTTTGATAATTGGAAGTGATGGAATATGGGATGTTTTTCGCAGCCAAAATGCTGTAGATTTTGCTAGGAGGAGACTTCAACAGCATAATGATGTGAAACAATGTTGCAAGGAAATAATAGGGGAGGCAATAAAGAGAGGAGCAACAGATAATTTAACTGTTGTGATGGTATGTTTCCAATCAGATCCACCACCACCTTTGGTTGTTGAAAGGCCTGCCAGAGTCAGGAGAAGCATATCTGCTGAGGGACTTCAGAATCTTAAATACCTGTTAGAAAGATAG 1155 0.4208 MCVQEGEQVDQDNNNMEKLDNRRISWPLHCDLLHAQMDNSENDSSCRISSDQISAVNSFPLESICEDAEIADKKQNLINFVPALRSGEWSDIGGRPYMEDTHICIEDLAKKFGYDVVCNEAISFYGVFDGHGGKSAAQFVRDHLPRVIVEDADFPLELEKVVTRSFLETDSEFAKTCSIESSLSSGTTALTAIIFGRSLLVANAGDCRAVLSRAGGVIELSKDHRPLCMKERMRIESLGGFVDDGYLNGQLGVTRALGNWHLEGMKEMSGRSGPLSAEPELKLMTLTKDDEFLIIGSDGIWDVFRSQNAVDFARRRLQQHNDVKQCCKEIIGEAIKRGATDNLTVVMVCFQSDPPPPLVVERPARVRRSISAEGLQNLKYLLER* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4642 384 ProSitePatterns PPM-type phosphatase domain signature. 124 132 IPR000222 GO:0043169
Mal5g4642 384 SUPERFAMILY PP2C-like 78 351 IPR036457 -
Mal5g4642 384 SMART PP2C_4 75 348 IPR001932 -
Mal5g4642 384 Gene3D - 67 353 IPR036457 -
Mal5g4642 384 PANTHER PROTEIN PHOSPHATASE 2C 1 369 IPR015655 GO:0004722|GO:0006470
Mal5g4642 384 Pfam Protein phosphatase 2C 97 342 IPR001932 -
Mal5g4642 384 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 1 369 - -
Mal5g4642 384 CDD PP2Cc 85 350 IPR001932 -
Mal5g4642 384 ProSiteProfiles PPM-type phosphatase domain profile. 85 350 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4642 Mal-Chr5 119151366 119153748 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4642 74 383 PP2C-type Phosphatase Gene Family AT2G25620 59.873 1.16e-131 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Mal5g4642 PP2C 3.8e-67 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4642 K14803 - gmx:100782648 652.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4642 5 119151366 119153748 Mal5g4642 5 119151366 119153748 ECH