Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4639 ATGGGAAGTAACGGCGTTGAAAAGCTCCCTAGCAGTAACAGCACTGGAAGTTCAGAAACCACTATTGAGATAAAGCTCAAAACACTGGATTCACAAACTTATACCCTCAAAGTGGATAAACAGATGCCAGTCCCTGCTCTGAAAGAACAGATTGCTTCTGTAACTGGAGTGTTATCAGAACGGCAGCGCTTAATATGCCAAGGGAAAGTTCTAAAGGATGATCAACTACTGTCTGCCTACCATGTTGAAGATGGTCACACATTGCATCTGGTTGTGAGGCATCCTGATCTGCCACCTCCAGGAAGTCTGCCCAATCATGCAGCAGCTGACCCAAATTCAAGCACAAGCCATGGTCACAGTACTCAAATTGCTCCAGGTGTCTTCATTGAAACTTTCAATGTTCCTGTTCAGGGTGATGGAGTTCCGCCTGAAATAAATAGGATTGTTTCTGCTGTTCTAGGCTCTATGACTGGACTTCCGAATTTTGCAAGTGGCGGTGAAGGGATTGTTGTCAGGGAGCATGATTCCCAAGGCCTTGGAAGAACTTCAGATTCTAGTGGAATATCAGATCAATTCCAGAGTTTGTCAGATAGATTACGGAATACTTTTGGACTTCCGGCATCAGTTTCTCTAGGGTCTTTGCAGCCTCCTGTCATTCCTGATTCTTTGACAACTTTGTCCCAGTACCTAAATCATATGAGCCATGAATTTGATACAATTGTCAGAGAAGCCAGAGAAGGGGGTAACAATGCCCAAGCAGCTGGGGCTCATAGTAATGAAGAAGTGGGATCTGGTTCTTCACGTTTGGGTTCAAGTTCAACACCAGGAAGTCTTTCATCACCCGCATCCTTGGCAGAAGTCTTGCTTTCTACCAGACGAATGATCAATCAACAAGCTGGGGAGTGCATACTTCAATTGGCAAGACAACTGGAGAATCAAGCAGATGTAACTGATGCCCCATCGCGATCAACCACTCAATCTAGGGCTTTGAGGACTGGAGTATTGTTTTATAACCTTGGTGCATTTTTACTTGAGCTTGGTCGCACAACCATGACACTGCGTTTGGGTCAAACTCCGTCTGAAGCTGTAGTTAACGGTGGACCTGCAGTTTTTATATCACCTACTGGTCCTAATCATATCATGGTTCAGCCTCTTCCTTTTCAAACTGGAGCAAGCTTTGGTGCTGTCCCTGTAGGAGCTGCACAGTCTGACTCAAGTTTAGGTAGTGGACTTGGCTCAAGTTTTTTCCCGAGGCGTATCGATATACAGATAAGACGAGGCACTTCAACAACCACACCCAATGCCAATCAAGAAGAGCGTGGGGATACACAATCTGCTTCAGTACAAAGAAATCCAGCTGAAAGTTCTGCTAGTCAAGCAACCTCTAGGCGTCCAGATGCATCTATCGCTGGAGAGTCAGGAATAAGGATATTGCCGATTAGAACCATGGTTGCAGCAGTACCTGGTCCCTTGGGTCGTCCTTCTTCAGAACCATCTGGTAATTCTACAGGGCTTTACCATCCAGTTCTTGGGAGATTTCAACGTGTAACTACAGGGCAGGCAAATAATGAACAGGGATCTCAATCAGCAAGTCAGCATCGTGCTGCACAACATTCAACTCCTGAATCCACATTGCAAAGGCAAAGCGCGGAAGACTCTGCAAGGAATGGCACCTCATCAGCTCCAAACACGAGACAAGAGCCATCTAATTCTCGTGTTGTAAATATCAATATTCTGGCAGCTGGCGGGCCCCAAAACAACCAAGAATCTGATAGACAGATACCTAGCAGTGTACTTCAGTTTATAAGAACGCTCTTCCCTGGTGGAGAAATTCATGTGGAGGATTCAAGCTTACAAGGAGCAAATGCAGGTTCCACCTCAGTGCAAGCTCCCCAAGTCCCTGAAGCTGAACCCCCTGTTACTGATGAAGGAGTGTTTTTGTCTAATGTGCTTCGTGAGATTATGCCGGTCATATCTCAACAAGTAAGGCCTGAGAGAAATCCTTCTGAAGATCAAATAGCTCAAGATTTGCCGACCCAGGTTGAAACAAATGCTGGGACATCACGAAGACACAGTGGTTCTGAACCAAGCCCTCCAGATCCAAAACGCCGAAAGATGGAATGA 2124 0.4581 MGSNGVEKLPSSNSTGSSETTIEIKLKTLDSQTYTLKVDKQMPVPALKEQIASVTGVLSERQRLICQGKVLKDDQLLSAYHVEDGHTLHLVVRHPDLPPPGSLPNHAAADPNSSTSHGHSTQIAPGVFIETFNVPVQGDGVPPEINRIVSAVLGSMTGLPNFASGGEGIVVREHDSQGLGRTSDSSGISDQFQSLSDRLRNTFGLPASVSLGSLQPPVIPDSLTTLSQYLNHMSHEFDTIVREAREGGNNAQAAGAHSNEEVGSGSSRLGSSSTPGSLSSPASLAEVLLSTRRMINQQAGECILQLARQLENQADVTDAPSRSTTQSRALRTGVLFYNLGAFLLELGRTTMTLRLGQTPSEAVVNGGPAVFISPTGPNHIMVQPLPFQTGASFGAVPVGAAQSDSSLGSGLGSSFFPRRIDIQIRRGTSTTTPNANQEERGDTQSASVQRNPAESSASQATSRRPDASIAGESGIRILPIRTMVAAVPGPLGRPSSEPSGNSTGLYHPVLGRFQRVTTGQANNEQGSQSASQHRAAQHSTPESTLQRQSAEDSARNGTSSAPNTRQEPSNSRVVNINILAAGGPQNNQESDRQIPSSVLQFIRTLFPGGEIHVEDSSLQGANAGSTSVQAPQVPEAEPPVTDEGVFLSNVLREIMPVISQQVRPERNPSEDQIAQDLPTQVETNAGTSRRHSGSEPSPPDPKRRKME* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4639 707 MobiDBLite consensus disorder prediction 249 280 - -
Mal5g4639 707 Gene3D - 15 105 - -
Mal5g4639 707 MobiDBLite consensus disorder prediction 424 466 - -
Mal5g4639 707 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 1 707 - -
Mal5g4639 707 ProSiteProfiles Ubiquitin domain profile. 22 97 IPR000626 GO:0005515
Mal5g4639 707 MobiDBLite consensus disorder prediction 620 639 - -
Mal5g4639 707 MobiDBLite consensus disorder prediction 661 707 - -
Mal5g4639 707 MobiDBLite consensus disorder prediction 424 474 - -
Mal5g4639 707 SMART ubq_7 22 93 IPR000626 GO:0005515
Mal5g4639 707 MobiDBLite consensus disorder prediction 95 121 - -
Mal5g4639 707 MobiDBLite consensus disorder prediction 662 694 - -
Mal5g4639 707 MobiDBLite consensus disorder prediction 107 121 - -
Mal5g4639 707 PRINTS Ubiquitin signature 32 52 IPR019956 -
Mal5g4639 707 PRINTS Ubiquitin signature 53 73 IPR019956 -
Mal5g4639 707 PRINTS Ubiquitin signature 74 95 IPR019956 -
Mal5g4639 707 PANTHER SCYTHE PROTEIN UBIQUITIN-LIKE DOMAIN PROTEIN 1 707 - -
Mal5g4639 707 MobiDBLite consensus disorder prediction 488 507 - -
Mal5g4639 707 MobiDBLite consensus disorder prediction 520 571 - -
Mal5g4639 707 MobiDBLite consensus disorder prediction 252 280 - -
Mal5g4639 707 Pfam Ubiquitin family 24 93 IPR000626 GO:0005515
Mal5g4639 707 SUPERFAMILY Ubiquitin-like 11 111 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4639 Mal-Chr5 119102786 119114162 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4639 22 93 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 37.500 1.15e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4639 K23390 - gmx:100783070 1017.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4639 5 119102786 119114162 Mal5g4639 5 119102786 119114162 ECH