Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4636 ATGGCGAAGCAGATCCACGAGGTCAAGTGTTTTCTTCTAACGGCGTGTAGAAAGGGCGCAAGGTCGGTGAAATCAAGAGGATATTTGTACACACTCTGTGTGTTTGATACTGATAAAGCTGGTAAGTTGAAGCAATCTCTTCCTCCTGGTTTGACAGTTCAAGATCTTTAG 171 0.4386 MAKQIHEVKCFLLTACRKGARSVKSRGYLYTLCVFDTDKAGKLKQSLPPGLTVQDL* 57
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4636 56 Pfam Ribosomal L38e protein family 23 55 IPR002675 GO:0003735|GO:0005840|GO:0006412
Mal5g4636 56 Gene3D - 1 56 IPR038464 -
Mal5g4636 56 PANTHER 60S RIBOSOMAL PROTEIN L38 1 56 IPR002675 GO:0003735|GO:0005840|GO:0006412
Mal5g4636 56 PANTHER - 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4636 Mal-Chr5 119071618 119073064 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4636 1 56 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 63.768 3.05e-23 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4636 K02923 - fve:101295764 82.8037