Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4586 ATGGGTTACTCTTTTTATGACAAAATTTCTTCATCTGGATATGATGATTTGGGCTTGTTCAATCCAAATTTGCATAATTGTAGAGCTTCCAATGGGGATTCTATTGGTGGGTTGTCATCATCATATTCACTGGTTTTGGAGAGTGAGAATGGAACGGTGGTGAAGTGGCATGCTACTGAAATTGTTGGTAAAGATGAGATTTCTGAGGCCAAAGGTTTAGCTTCTTTGAAGAACCATAGGGAAGCAGAGAAGAGAAGGAGGGAAAGAATAAATGGTCATCTTGCAACATTATGTGGTCTTTTGGGTTAG 309 0.3916 MGYSFYDKISSSGYDDLGLFNPNLHNCRASNGDSIGGLSSSYSLVLESENGTVVKWHATEIVGKDEISEAKGLASLKNHREAEKRRRERINGHLATLCGLLG* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4586 102 PANTHER DNA BINDING PROTEIN-LIKE 3 101 - -
Mal5g4586 102 Gene3D - 73 102 IPR036638 GO:0046983
Mal5g4586 102 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 74 102 IPR011598 GO:0046983
Mal5g4586 102 PANTHER TRANSCRIPTION FACTOR BHLH30 3 101 IPR045847 GO:0003700|GO:0006355
Mal5g4586 102 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 75 101 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4586 Mal-Chr5 118414839 118415147 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4586 67 97 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G56770 61.290 4.05e-07 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4586 - - gmx:100804756 116.701