Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4552 ATGGAGATGGATAACAACAAGTGTGGATGTTGGTCTGTTCTTAAACGTGGTGTTTGTAAACCATCTGCTTCTAGACACTCTCCTAACACTATCCCTCGTACTAGTGTTGTTCATGATGCAGCAACGGAGACACGATACCTGAATGCTAGCAATCGAGAACTGAGTCCTCCAAATGAAGCTAGAGTTTCTTCTGATAATCCTGACCCTCCACCTCAGGAAAATAAGGCTCCTTGTCAGCTTCTTCAATTCACATTTCAAGAGCTAAAATCTGCAACTGGAAATTTCAGACCTGATAGCATCCTTGGGGAGGGTGGATTTGGTTATGTTTTCAAAGGATGGATTGAGGAAGGTGGAACTGCCCCAGCGAAACCCGGTTCAGGAGTTACAGTTGCTGTCAAAAGTTTGAAGCCAGATGGTCTTCAAGGCCATAGAGAATGGGTGGCTGAAGTTGATTTTCTTGGACAGCTTCACCATCCTAACCTTGTGAAACTTATTGGTTACTGCATTGAAGATGATCAGCGGCTACTTGTTTACGAGTTTATGACTCGTGGAAGTCTAGAAAATCATCTTTTCAGAAGAACCGTACCTCTTCCATGGTCCAACAGGGTTAAGATTGCACTTGGTGCTGCTAAAGGATTGGCTTTCCTCCATAATGGTCCAGAACCAGTCATCTATAGAGATTTCAAAACATCAAACATTTTGCTTGATACGGAGTATACCGCGAAGCTTTCAGATTTCGGTCTAGCAAAAGCAGGACCTCAAGGAGACAAGACACATGTTTCAACCAGAGTTGTTGGAACTTATGGTTATGCTGCTCCAGAATATGTCATGACAGGACACTTAACTTCTAAGAGTGATGTTTATAGCTTTGGAGTTGTGTTACTCGAGATTTTAACAGGAAGAAGATCGATGGACAAGAAACGTCCGAGCGGGGAACAAAATCTTGTTTCATGGGCTAGACCATATTTAGCTGACAAGCGAAAATTGTACCAACTAGTTGATCCTCGCTTGGAACTAAACTATTCTTTAAAAGCAGTGCAGAAAATTGCTCAGTTAGCTTATAGTTGCCTTAGTAGAGACCCTAAAAGCCGTCCTAACATGGACGAAGTTGTGAAGGCTCTGACACCACTGCAGGATCTTAACGACTTTGCTATTTTGTCGTATCACTCTCGTTTATCTCAACAAGGAAGAAGAAAGAAGAAACCAGATGGAACTCCGCATATCACTTATACACATTCCAAAAGCATGAGGGCTTCACCTTTGAACACCGGCAGGCACATACGATGA 1287 0.4274 MEMDNNKCGCWSVLKRGVCKPSASRHSPNTIPRTSVVHDAATETRYLNASNRELSPPNEARVSSDNPDPPPQENKAPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEEGGTAPAKPGSGVTVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTVPLPWSNRVKIALGAAKGLAFLHNGPEPVIYRDFKTSNILLDTEYTAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVSWARPYLADKRKLYQLVDPRLELNYSLKAVQKIAQLAYSCLSRDPKSRPNMDEVVKALTPLQDLNDFAILSYHSRLSQQGRRKKKPDGTPHITYTHSKSMRASPLNTGRHIR* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4552 428 ProSitePatterns Protein kinases ATP-binding region signature. 101 133 IPR017441 GO:0005524
Mal5g4552 428 ProSiteProfiles Protein kinase domain profile. 95 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g4552 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Mal5g4552 428 Gene3D Phosphorylase Kinase; domain 1 71 180 - -
Mal5g4552 428 PANTHER OS01G0588500 PROTEIN-RELATED 71 394 - -
Mal5g4552 428 Gene3D Transferase(Phosphotransferase) domain 1 181 391 - -
Mal5g4552 428 MobiDBLite consensus disorder prediction 392 428 - -
Mal5g4552 428 Pfam Protein tyrosine and serine/threonine kinase 99 374 IPR001245 GO:0004672|GO:0006468
Mal5g4552 428 MobiDBLite consensus disorder prediction 48 76 - -
Mal5g4552 428 CDD STKc_IRAK 101 377 - -
Mal5g4552 428 PANTHER OS01G0588500 PROTEIN 71 394 - -
Mal5g4552 428 MobiDBLite consensus disorder prediction 48 69 - -
Mal5g4552 428 SUPERFAMILY Protein kinase-like (PK-like) 77 382 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4552 Mal-Chr5 117890335 117893155 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4552 83 374 Glycoside Hydrolase AT3G07070 55.743 3.36e-111 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mal5g4552 PK_Tyr_Ser-Thr 1.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4552 - - gmx:100785385 801.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4552 5 117890335 117893155 Mal5g4552 5 117890335 117893155 ECH