Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4540 ATGATCATTATTGTTGCAATGTCACTACAAACCTCAGAAGCTGAAGATTACACAGTTGGAGGAGATTTCATAGGTTGGACTAGTTTTCCTCCTGGTGGTGACTCTTTCTATTCCAAATGGGCTGCAAATTTTACATTCAAACTAAACGACAATTTAGTGTTCAATTATGAATCTGGAAGCCACAGTGTGGTTATACTTAACAAAGCTAACTATGAAAATTGTAACATCAATGACAAAAATATTCAAACCTTTAACCAAGGACCAACCAAAATACCCTTGGATCGCATTGGTGATTTTTACTTTAGCTGCACCTTATCAGGCCATTGCACTAGTGGCCAAAAGCTAAGTGTTAAAGTCATTGCCTCTGAAGTTCCAGCTGAAGCTCCTTCTTTTATAACAGGACCAGGTGTTACTGCTCTTCCACCACAGAGTTCAGCCACACCTATGGCTGCTACCTTCACTCTTGTCCTCATTACTATTGCCTTCAATTTTTTGTCTCAATTTTAA 507 0.3866 MIIIVAMSLQTSEAEDYTVGGDFIGWTSFPPGGDSFYSKWAANFTFKLNDNLVFNYESGSHSVVILNKANYENCNINDKNIQTFNQGPTKIPLDRIGDFYFSCTLSGHCTSGQKLSVKVIASEVPAEAPSFITGPGVTALPPQSSATPMAATFTLVLITIAFNFLSQF* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4540 168 Pfam Plastocyanin-like domain 34 113 IPR003245 GO:0009055
Mal5g4540 168 PANTHER BLUE COPPER PROTEIN 2 156 IPR039391 GO:0009055
Mal5g4540 168 SUPERFAMILY Cupredoxins 14 120 IPR008972 -
Mal5g4540 168 Gene3D - 14 129 IPR008972 -
Mal5g4540 168 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 2 156 - -
Mal5g4540 168 ProSiteProfiles Phytocyanin domain profile. 15 121 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4540 Mal-Chr5 117591044 117591707 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4540 14 157 Phytocyanin Superfamily AT4G31840 35.811 2.21e-23 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4540 - - mtr:MTR_4g114830 251.906