Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4529 ATGAGCGTTGAAAAAGTAATGAAAAAAGTGAGGAGAAAGATCGGAAAGTATGAGGTTGGTCGAACAATTGGTGAAGGTACATTCGCTAAGGTCAAATTCGCTAAACACACTGAGACAGGGGAAAGTGTGGCGATTAAACTCATGGCTAAAACTACCATTCTCAAGCATAAAATGGTTGAACAGATTAAAAGAGAGATATCCATTATGAAGATTGTCAGGCACCCCAATATAGTCAGATTGCATGAGGTTTTGGCCAGCCAGACCAAGATCTACATAATCCTGGAGTTTGTAATGGGAGGGGAATTATATGATAAAATTGTTCAGCAGGTAAAGCTTTCTGAAAATGAATCTAGGCGCTACTTTCAACAACTTATAGATGCTGTTTCTCATTGTCATAATAAGGGCGTGTACCATAGAGACTTGAAGCCTGAAAACCTTCTTCTTGATGCTTACGGAAATTTGAAGGTTTCTGACTTTGGATTGAGTGCATTGACTAAGCAGGGTGATGAGCTTCTTCACACCACATGTGGGACCCCAAATTATGTTGCCCCTGAGGTGCTCAGCAATCAAGGTTATGATGGTGCAGCAGCTGATGTATGGTCATGTGGAGTCATTCTATATGTTCTAATGGCTGGATATCTTCCATTTGAGGAGGCAGACCTTCCAACGTTGTTCAGAAGGATCAGTGCTGCAGAATTTGTTTGCCCATTATGGTTTTCTGCTGGCGCGAAGACATTTATCCATAAAATTTTGGACCCTAATCCTCAAACACGGGTGAAAATCAAAGAAATAAAGAAAGATCCATGGTTCCGGAAAAACTACTCTCCTGTCAAACTCAGGGAAGATGAGCAAGTGAATTTGGATGACATTAAGGCTGTTTTTGATGATATTGAGGACCAGTATGTTTCTGAACGGTCAGAAGTCACCGAGGGAGGTCCTTTGATAATGAATGCATTTGAGATGATAACCTTATCACAAGGGCTGAATCTTTCACCACTATTTGACAGGCATCAGGATTATGGAAAACGACAGACTCGTTTTGTTTCACGTAAACCAGCAAGAGTTATAATTTCATCTATTGAAGCTGTTGCAGAGTCAATGGGCCTTAAGGTCCATTCTCACAATTACAAGATGAGGATCGAAAGAGTTTCTTCAAATAAGGTTGGACAATTTGCAGTGGTCTTGGAGGTGTTTGAAGTTGCACCATCCCTTTTCATGGTGGATGTTCGAAAGGCAGCTGGGGATACTCTGGAGTATCACAAGTTTTACAAGAACCTCTGTGCGAAACTAGAGAGCATTATTTGGAGACCGGCAGAGACTAGCCCAGATTCTGGTTTGCTTCGACAAATGACATTCTGA 1359 0.4135 MSVEKVMKKVRRKIGKYEVGRTIGEGTFAKVKFAKHTETGESVAIKLMAKTTILKHKMVEQIKREISIMKIVRHPNIVRLHEVLASQTKIYIILEFVMGGELYDKIVQQVKLSENESRRYFQQLIDAVSHCHNKGVYHRDLKPENLLLDAYGNLKVSDFGLSALTKQGDELLHTTCGTPNYVAPEVLSNQGYDGAAADVWSCGVILYVLMAGYLPFEEADLPTLFRRISAAEFVCPLWFSAGAKTFIHKILDPNPQTRVKIKEIKKDPWFRKNYSPVKLREDEQVNLDDIKAVFDDIEDQYVSERSEVTEGGPLIMNAFEMITLSQGLNLSPLFDRHQDYGKRQTRFVSRKPARVIISSIEAVAESMGLKVHSHNYKMRIERVSSNKVGQFAVVLEVFEVAPSLFMVDVRKAAGDTLEYHKFYKNLCAKLESIIWRPAETSPDSGLLRQMTF* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4529 452 Pfam Protein kinase domain 17 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g4529 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Mal5g4529 452 ProSitePatterns Protein kinases ATP-binding region signature. 23 55 IPR017441 GO:0005524
Mal5g4529 452 SUPERFAMILY Protein kinase-like (PK-like) 14 323 IPR011009 -
Mal5g4529 452 Pfam NAF domain 313 372 IPR004041 GO:0007165
Mal5g4529 452 Gene3D Transferase(Phosphotransferase) domain 1 7 313 - -
Mal5g4529 452 CDD CIPK_C 317 427 - -
Mal5g4529 452 SMART serkin_6 17 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g4529 452 ProSiteProfiles NAF domain profile. 311 335 IPR018451 GO:0007165
Mal5g4529 452 PANTHER - 10 444 - -
Mal5g4529 452 Gene3D Kinase associated domain 1, KA1 314 436 - -
Mal5g4529 452 ProSiteProfiles Protein kinase domain profile. 17 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g4529 452 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 10 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4529 Mal-Chr5 117397397 117407062 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4529 7 378 CBL-interacting serine-threonine protein kinases AT5G35410 73.118 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mal5g4529 Pkinase 1.1e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4529 - - gmx:100811380 795.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4529 5 117397397 117407062 Mal5g4529 5 117397397 117407062 ECH