Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4526 ATGGAAAGTGGGAACAGATCATGGGAAGAAGACATTTACTGGACCCATTTTCAGTTCATCCATTTCACTCAATTTCTTCGCAACACTGATTTTCAGCAACAACTTAAGAAGTTGCCAGAAAATGTGACCCTTAAAGGTCCTAGTGGAGTTGTGTGGAATATAGGGCTGAAAACTAGAGATGATACTGTTTACTTCGTGGATGGTTGGCAACGATTCGTGAACGATCACTCTTTGAATGAGAATGATTTCCTTGTTTTCAAGTACAATGGTGAATCACTCTTTGAGGTTTTAATCTTTGATGGTGACAGTTTCTTTGATGATGATACTGTTTTAATCTGA 339 0.3805 MESGNRSWEEDIYWTHFQFIHFTQFLRNTDFQQQLKKLPENVTLKGPSGVVWNIGLKTRDDTVYFVDGWQRFVNDHSLNENDFLVFKYNGESLFEVLIFDGDSFFDDDTVLI* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4526 112 Gene3D - 15 102 IPR015300 -
Mal5g4526 112 SMART B3_2 22 102 IPR003340 GO:0003677
Mal5g4526 112 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 5 105 - -
Mal5g4526 112 ProSiteProfiles B3 DNA-binding domain profile. 42 102 IPR003340 GO:0003677
Mal5g4526 112 SUPERFAMILY DNA-binding pseudobarrel domain 18 101 IPR015300 -
Mal5g4526 112 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 5 105 IPR044837 -
Mal5g4526 112 Pfam B3 DNA binding domain 25 100 IPR003340 GO:0003677
Mal5g4526 112 CDD B3_DNA 35 98 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4526 Mal-Chr5 117366461 117366832 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4526 8 109 REM Transcription Factor Family AT4G33280 50.000 2.07e-30 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mal5g4526 B3 6.1e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4526 - - mtr:MTR_1g021440 184.111