Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4521 ATGAGCCAACATTCATGCCAGCTTAACAATTTACAAAGATCAAATGTTAACAACCAAGAGATGACAGAACCTGCAAATACTGTGACTATGGCATCTGATAGTGAAACCACCGGGGAGGAAAAATTGTCGCCGCCTCCTGAAATAGCAATTGGAATTGATATTGGCACTTGGCCACGTTGTGTTGCTGTCTGGAATGGTTCCAAATTGGAGCTTTTTAGCAACGCAACAAATGAGAACATTATGAAATCGTCTGAAATTTTCAAAGATGATGGCTCTTCTATTGGAGTTATCAGTGCTAGTGAACTCTCACTCTCCGAAGACCAAGCACATGACATGTTGTATGAAGCTACAATTTACAACATGAGACGCTTGATTGGCAGAATTGATACTGATCCAGTAGTTCAAGCAAGTAAAAATTTCCCATTTCTGGTGCAGACTTTGGACATTGGCGATCGCCCTTTTATTGCTGCGCCAATGGACATATCGTGGAAATATACTACTGCAGAACGAGTCCTTGCAGCATATCTGGGTCAATTAAGAGTATTGGCTGAAACTCAACTGCAACGGCCTGTAAGAAATGTAGTGTTTACGGTTCCAGTTTCTTTCAGTCGATTCCAGCTAACCCGAATACAATATGCTTGTGCGATGGCCGGTCTTCATGTTCTCAAGCTGATGCCTCAACCAACAGCAGTGGCTTTGTTGTATGCACAGCAACAAATGCAGGCTTCTTTTTCCGACAAGGATATGGGCGGTGAAAGCAACAAAATTGCTCTCATTTTCAGTATGGATTCTGGTTATTGTGATGTTGCTGTGACTGCTGCTACAGCAGAAGGAGAATGCAGAATGAAAACCTTGGCAGGAAGTGCTATTGGTGGAGAAGACTTGCTTGGAAATATGATGCGTTATCTCTTACCAGATTCTGAAAATTTATTCAAGAAACATATTGATGGGGACAAGGCAATTAAATCAATGAGCTTGCTTCGAGTGGCAACCCTGGAAGCGATTCATCGGTTTTCCTCTCAGACAAGTGTTGAGTTTGATTTAGACTTGGGAGATGGTTTGAAGATACGGAAGGTTGTAAAGAGGGAGGATTTTGAGGAGGTAAACAAAGAGGTGTTTGAAAAGTGTGAAAGGTTAATCATCCAGTGCTTGCAAGACGCAGAGGTAAAAGTTGAGGATATAGACGATGTGATAATTGTTGGTGGATGTTGGAATATACCAAGGGTGAAGAATCTTGTTACTAAAATATGCAAAGGAAAGGAACATTATAAAGGAATGAATCCTTTGGAAGCTGCACTTTGTGGTGCAGCAGTGGCAGGAGCTGTTGCTTCGGGCATTGATGATCCCAACTTAGACTTGATTACATCTCACGTCACACCTCTTGCCGTTGGAATTAAAGCTAATGGGAACGACTTTGTCCCTGTAATTCCAAGGAACACATCGATGCCAACAATGAGGGTTAAAGATTTCACAACTATTCATGATAATCAAACCGAGGCACTGATTCTTGTCTATGAAGGTGAGGGACAGAAGGCTGAAGAAAACCACCTTTCGGGATATTTGAAACTAACGGGAATACCTGAAGCACCAAAAGGAGTTCCAGAAATCAATGTGTGTATGAACATAGACGGTGAAAACGGGCTGAGAGTTGTAGCTGTTGTTTACATGCCTGGATCAGACCAACCTGCAATTCCTGCTATGGAAGCGAGGATGCCTATTCCAATGATCGATGATGGGTTTGGTTGGTATACTGAGGCACTAAATAGAACCTATGGTGACACAATGGATTTGGTTACTCTCCTTGAGAAGGAATAA 1815 0.4215 MSQHSCQLNNLQRSNVNNQEMTEPANTVTMASDSETTGEEKLSPPPEIAIGIDIGTWPRCVAVWNGSKLELFSNATNENIMKSSEIFKDDGSSIGVISASELSLSEDQAHDMLYEATIYNMRRLIGRIDTDPVVQASKNFPFLVQTLDIGDRPFIAAPMDISWKYTTAERVLAAYLGQLRVLAETQLQRPVRNVVFTVPVSFSRFQLTRIQYACAMAGLHVLKLMPQPTAVALLYAQQQMQASFSDKDMGGESNKIALIFSMDSGYCDVAVTAATAEGECRMKTLAGSAIGGEDLLGNMMRYLLPDSENLFKKHIDGDKAIKSMSLLRVATLEAIHRFSSQTSVEFDLDLGDGLKIRKVVKREDFEEVNKEVFEKCERLIIQCLQDAEVKVEDIDDVIIVGGCWNIPRVKNLVTKICKGKEHYKGMNPLEAALCGAAVAGAVASGIDDPNLDLITSHVTPLAVGIKANGNDFVPVIPRNTSMPTMRVKDFTTIHDNQTEALILVYEGEGQKAEENHLSGYLKLTGIPEAPKGVPEINVCMNIDGENGLRVVAVVYMPGSDQPAIPAMEARMPIPMIDDGFGWYTEALNRTYGDTMDLVTLLEKE* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4521 604 Gene3D - 240 423 - -
Mal5g4521 604 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 445 564 IPR029047 -
Mal5g4521 604 Pfam Hsp70 protein 49 556 IPR013126 GO:0005524|GO:0140662
Mal5g4521 604 Gene3D Actin; Chain A, domain 4 291 375 - -
Mal5g4521 604 Gene3D - 119 174 - -
Mal5g4521 604 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 458 560 IPR029047 -
Mal5g4521 604 SUPERFAMILY Actin-like ATPase domain 254 442 IPR043129 -
Mal5g4521 604 PRINTS 70kDa heat shock protein signature 426 446 - -
Mal5g4521 604 PRINTS 70kDa heat shock protein signature 194 214 - -
Mal5g4521 604 PRINTS 70kDa heat shock protein signature 533 549 - -
Mal5g4521 604 PRINTS 70kDa heat shock protein signature 48 61 - -
Mal5g4521 604 PRINTS 70kDa heat shock protein signature 452 471 - -
Mal5g4521 604 PRINTS 70kDa heat shock protein signature 394 410 - -
Mal5g4521 604 MobiDBLite consensus disorder prediction 1 24 - -
Mal5g4521 604 PANTHER HEAT SHOCK PROTEIN 70KDA 27 603 IPR013126 GO:0005524|GO:0140662
Mal5g4521 604 SUPERFAMILY Actin-like ATPase domain 48 236 IPR043129 -
Mal5g4521 604 Gene3D - 50 440 - -
Mal5g4521 604 PANTHER HEAT SHOCK 70 KDA PROTEIN 8 27 603 - -
Mal5g4521 604 CDD HSP70_NBD 50 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4521 Mal-Chr5 117315728 117319512 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4521 49 552 Calmodulin-binding Proteins AT3G12580 35.167 1.01e-87 284