Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4516 ATGGATGCCTCCTATACTGCAACTATCACCTTCCTGTTGTTCATGTCCTTACCATTACCAAATACTGGAGCTCAAACACAATCACAACTACATTTACTAGAGCGGATAGCACCAGGTTCCTCACTTTCCCCCCGTAGCAGCGATTACAACTCTATGTGGCTTTCTCCTTCTGGCCTATTTGCTTTTGGCTTTTATGCACAAGGCAACGATAACTTTGCCGTTGGAATTTGGTTTGCTGGTATTGGCACGATGAAAAAGACAATTGTATGGACTGCAAACCGTGATGACCCTCCAGTAACCTCAACTGCAAAGCTACAATTTACCATGAATGGTACAATAATACTAACAGATCAACAGGGACAAGAGAAGCTTATTGTTAATACTAATACAAGAGCTTCCTCTGCCTCCATGCTTGATTCTGGCAACTTTGTACTGTATGACGACAATAATATTTCCAGCATCATATGGCAGAGTTTCGATCACCCGACTGATACTTTGTTGGGGAGTCAATCTCTACCTTGTGGAGGCCAACTTTCCTCTAGTTTATCAGAGACCAACAGCTCAACTGGAAGGTTTCAACTCAATATGCAGGTTGATGGAAATCTTGTTCTGTATCCAGCATACATAGCTGAAACAGTTTGGGATGCTTATTTGGCCTCTGACACTCTTAGCGCCAATGCCAAACATCATCTTTACCTCAACAGGACAGGTTTACTGCAGATCTGGAATGACAGTGGTGCTTCTAGCCTTATTAAAACTTTGTCCAATACTGAAAAAGACCAGCAGAACACCGGAGGAAAACAGACTATTTATCGTGCAACTCTTGATTTTGATGGGGTTTTTCGGCTGTATGCTTATCATGCAAACAATGGAAGCAACATTATTATGGGAAGTTGGCCGGGGAGGAATCCATGTGATGTAAAGGGGTTTTGTGGTTACAACAGTTTGTGCACATTCGATGATGACAAACCAGTGTGCTATTGTCTCCCAGGTTATAAATTTATAGATGCAAATGAAGATACTCTTGGCTGTGAAAGGAACTATTCAACATCAGAGTGTAGAGGTGACAAAGATGGTGCAGCCTTTTATAACATGGTCTCAATGACAAGTATTGTTTGGAACGACCATCCTTATTTCAAAGATGATGATATGTCATCAGAAGACGAATGCTTATTTGCTTGTTTGGTTGATTGTAACTGTTGGGCTGCAATTTATGAAAAAGGAAGATGCAAGAAACAAGGACTTCCTTTCAAATATGTCAAACGAACATATGGAGCTGACGATTTTACCACAGCTTTCTTTAAGGTTGGAAACAACAACATCACAAGCTCAAAGGGGTATGAAAAGCCTTTTGCTTCTCCAATCAAGACTACAAGTAACAAAGCAATAGTATATATTATTGTTGTTACGTCCTTGTTTAGCATCATGTTGTGTTCAGCAATTGTTATATCCATCCATTACATGTACAAGATTCGGGTATTAAAGTATAAAAGGCTAACAGAAACTGGTAACTTTGGAGGGCTGAATGCAGATTTGGCTTTGAGAAGGTTTACATACAATGAGCTGAGAAGAGCAACAAATCATTTCAAGGAAGAGTTGGGTAAGGGTGCTTTTGGAAAAGTTTACAAAGGAGCATTAAACAAAGGTAAGAGATTGATTGCAGTGAAGAGACTAGAGAAGGTGGTGGAAGAAGGGGAAAGGGAATTTCAAGCAGAAGTGAGATCCATTGGGAAAACCCACCACAGGAACCTAGTTAGATTGCTGGGTTTTTGCGTTGAGGGTTCGAAAAGGCTTTTGGTTTATGAATACATGAGCAACGGATCACTTGAAAAGCTTCTCTTTGGTGATCAAAGACGTCCAGATTGGGATGAGAGAGTAAGAATAGCACTGGACATTGCTAGAGGGATCTCGTATCTCCATGAAGAGTGTGAGGCACCAATCATTCATTGTGACATAAAGCCTCAAAACATTTTGTTGGACGAGTTTTGGACTGCCAAGGTATCTGATTTTGGTCTTGCAAAACTTCTAATGCCGGACCAAACCAGAACTTTCACGGTTGTTAGAGGGACACGAGGCTACATGGCTCCAGAATGGAACATGAACGTGCCAATATCATTGAAGGCAGATGTTTATAGCTATGGAATAATGTTGTTTGAAATTTTATGTTGTAGAAGAAACCTAGATGTTAATGTGTTGGAACCTGAGGAGATTCTTCTCTCTGGTTGGGCTTATAAGTGCTTTGTTGCAGGAGAGGTGAATAATCTTGTTCCTTGGGAATTCATTGATAATAATGTCATGGAAAATATGGTTAAGGTGGCACTTTGGTGTATCCAAGAGGACCCTTTTCTGAGGCCAACGATGAAGGGTGTGGTGTTGATGTTAGAAGGAGTTACTGATATAGCAATTCCTCCTTGTCCAGATTCCAATTATGCATAA 2436 0.406 MDASYTATITFLLFMSLPLPNTGAQTQSQLHLLERIAPGSSLSPRSSDYNSMWLSPSGLFAFGFYAQGNDNFAVGIWFAGIGTMKKTIVWTANRDDPPVTSTAKLQFTMNGTIILTDQQGQEKLIVNTNTRASSASMLDSGNFVLYDDNNISSIIWQSFDHPTDTLLGSQSLPCGGQLSSSLSETNSSTGRFQLNMQVDGNLVLYPAYIAETVWDAYLASDTLSANAKHHLYLNRTGLLQIWNDSGASSLIKTLSNTEKDQQNTGGKQTIYRATLDFDGVFRLYAYHANNGSNIIMGSWPGRNPCDVKGFCGYNSLCTFDDDKPVCYCLPGYKFIDANEDTLGCERNYSTSECRGDKDGAAFYNMVSMTSIVWNDHPYFKDDDMSSEDECLFACLVDCNCWAAIYEKGRCKKQGLPFKYVKRTYGADDFTTAFFKVGNNNITSSKGYEKPFASPIKTTSNKAIVYIIVVTSLFSIMLCSAIVISIHYMYKIRVLKYKRLTETGNFGGLNADLALRRFTYNELRRATNHFKEELGKGAFGKVYKGALNKGKRLIAVKRLEKVVEEGEREFQAEVRSIGKTHHRNLVRLLGFCVEGSKRLLVYEYMSNGSLEKLLFGDQRRPDWDERVRIALDIARGISYLHEECEAPIIHCDIKPQNILLDEFWTAKVSDFGLAKLLMPDQTRTFTVVRGTRGYMAPEWNMNVPISLKADVYSYGIMLFEILCCRRNLDVNVLEPEEILLSGWAYKCFVAGEVNNLVPWEFIDNNVMENMVKVALWCIQEDPFLRPTMKGVVLMLEGVTDIAIPPCPDSNYA* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4516 811 Gene3D - 33 161 IPR036426 -
Mal5g4516 811 SUPERFAMILY Protein kinase-like (PK-like) 512 795 IPR011009 -
Mal5g4516 811 PANTHER RUST RESISTANCE KINASE LR10-RELATED 29 808 IPR045874 GO:0004672
Mal5g4516 811 ProSitePatterns Serine/Threonine protein kinases active-site signature. 647 659 IPR008271 GO:0004672|GO:0006468
Mal5g4516 811 ProSitePatterns Protein kinases ATP-binding region signature. 533 556 IPR017441 GO:0005524
Mal5g4516 811 Gene3D Transferase(Phosphotransferase) domain 1 604 802 - -
Mal5g4516 811 CDD STKc_IRAK 533 796 - -
Mal5g4516 811 Pfam Protein kinase domain 529 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g4516 811 SUPERFAMILY alpha-D-mannose-specific plant lectins 188 284 IPR036426 -
Mal5g4516 811 Gene3D - 174 294 IPR036426 -
Mal5g4516 811 Gene3D Phosphorylase Kinase; domain 1 495 603 - -
Mal5g4516 811 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE LECRK1 29 808 - -
Mal5g4516 811 SMART blect_4 44 162 IPR001480 -
Mal5g4516 811 CDD B_lectin 46 162 IPR001480 -
Mal5g4516 811 Pfam D-mannose binding lectin 87 171 IPR001480 -
Mal5g4516 811 SMART serkin_6 527 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g4516 811 ProSiteProfiles Protein kinase domain profile. 527 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g4516 811 ProSiteProfiles Bulb-type lectin domain profile. 39 158 IPR001480 -
Mal5g4516 811 PIRSF SRK 3 811 IPR024171 GO:0004674
Mal5g4516 811 SUPERFAMILY alpha-D-mannose-specific plant lectins 87 205 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4516 Mal-Chr5 117273340 117275775 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4516 463 800 Receptor kinase-like Gene Family AT1G56120 42.274 2.41e-67 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mal5g4516 Pkinase 8.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4516 - - ahf:112707609 964.911