Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4478 ATGGCCACCATCACCACACCTTACAGAGATATTGAACCTGACTACGACAGCAGCTCTTCATCCATCACCGTACCAGAATCAACCCGAAGCTGGATGAGTAACCTCAGCTTCGGAAGCCGCCCTCGTCGAAGCTCCGTCTCCGTTTCTTCCACCACCTCTTCAATACTAGCTTCCAACGCTAAGCCTCACAAGGCAAACCAAGTTGCATGGGAAGCTATGAGTCGACTCCGCCTCGACCAAGGTCGAGTCGGACTCGACCACTTCCGCCTCTTACGCCGTCTCGGAAGCGGCGACATAGGGAATGTTTATCTTTGTCAGATAAGAAACCCTGTGGTGGGTTTGCCTCAGTGTTTTTATGCTATGAAAGTTGTTGATAGAGAAGCACTTGCTATAAGGAAGAAGCTTCAAAGAGCAGAAATGGAGAAGGAGATTTTGGGCATGCTTGATCACCCTTTTTTGCCTACTTTGTATACTGAGTTTGATGCTTCTCATTACTCTTGTTTGGTTATGGAGTTTTGTCCTGGTGGTGATTTGTATGCTTCTCGCCAACGTCAACCTGGGAAGCGATTTTCCTTATCATCTGCTAAGTTTTATGCAGCTGAGACACTATTGGCACTAGAGTATCTACACATGATGGGAATAGTATACAGAGATTTAAAGCCAGAGAATGTTTTAGTAAGAGAAGATGGACACATAATGCTTTCAGATTTTGATCTTTCTCTTAAATGTGACGTTGTTCCAAAGCTCTTAAGAAGCAAAACAAGATTAGAACGAAGTATCAAAACTACTACTACAAAGAGATGTTCAACACCTTCATGCATTTCTCCCATGCAACCAGTTCTGTCCTGTTTCTTATCATCATCATCATCATCATCATCAAAGAAGAAGAAAACAAGACTTGAAACAGTTATAAGAGAAAATGTTCAAGAAGAGTTTGAGTTTGATCTTGATCCTGATTTTGTAGCTGAACCAATTGAAGCAAGATCAAAATCATTTGTGGGGACACATGAATATTTAGCACCAGAAGTTATATTAGGACAAGGTCATGGAAGTGCAGTGGATTGGTGGACATTTGGTGTTTTTTTATATGAAATGTTATATGGAAGAACACCATTTAAAGGTGAAAACAATGAGAAAACATTGGTTAACATTCTCAAACAACCTTTGACTTTTCCTAGGATTGGTGTTAGTAGTAATTATGAGTTTGAAGAAATGGTGAAAGTTCAAGATCTTATTAGCAAATTGTTGGTGAAGAATCCAAATAAGAGAATTGGAAGTTGTTTGGGTTCTGTTGAGATTAAAAGACATGAATTTTTCAAGGGTGTGAATTGGGCTTTGATTAGATCAGTTAGACCCCCTGAGGTTCCTAGTGATAAGAATAAGATTAGGAATAGGGTCTTGGTGCCTAAATTAAGCAAGAAAGAGAGGGATCAACCATTTCAGCTTAATCATCAATTTGATTACTTCTAA 1470 0.3986 MATITTPYRDIEPDYDSSSSSITVPESTRSWMSNLSFGSRPRRSSVSVSSTTSSILASNAKPHKANQVAWEAMSRLRLDQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPVVGLPQCFYAMKVVDREALAIRKKLQRAEMEKEILGMLDHPFLPTLYTEFDASHYSCLVMEFCPGGDLYASRQRQPGKRFSLSSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSLKCDVVPKLLRSKTRLERSIKTTTTKRCSTPSCISPMQPVLSCFLSSSSSSSSKKKKTRLETVIRENVQEEFEFDLDPDFVAEPIEARSKSFVGTHEYLAPEVILGQGHGSAVDWWTFGVFLYEMLYGRTPFKGENNEKTLVNILKQPLTFPRIGVSSNYEFEEMVKVQDLISKLLVKNPNKRIGSCLGSVEIKRHEFFKGVNWALIRSVRPPEVPSDKNKIRNRVLVPKLSKKERDQPFQLNHQFDYF* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4478 489 PANTHER FLIPPASE KINASE 1-RELATED 9 489 - -
Mal5g4478 489 Gene3D Phosphorylase Kinase; domain 1 86 172 - -
Mal5g4478 489 Gene3D Transferase(Phosphotransferase) domain 1 173 276 - -
Mal5g4478 489 Coils Coil 121 141 - -
Mal5g4478 489 Gene3D Transferase(Phosphotransferase) domain 1 327 457 - -
Mal5g4478 489 CDD STKc_phototropin_like 86 456 - -
Mal5g4478 489 SMART serkin_6 88 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g4478 489 MobiDBLite consensus disorder prediction 1 23 - -
Mal5g4478 489 SUPERFAMILY Protein kinase-like (PK-like) 70 457 IPR011009 -
Mal5g4478 489 ProSiteProfiles Protein kinase domain profile. 88 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g4478 489 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Mal5g4478 489 Pfam Protein kinase domain 329 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g4478 489 Pfam Protein kinase domain 89 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g4478 489 PANTHER PROTEIN KINASE PINOID 2 9 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4478 Mal-Chr5 116832992 116834782 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4478 1 489 AGC Kinase Gene Family AT2G26700 59.701 0.0 607
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mal5g4478 Pkinase 2.6e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4478 K08286 - gmx:100777988 776.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4478 5 116832992 116834782 Mal5g4478 5 116832992 116834782 ECH