Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4473 ATGGAAGACAGAAAAGTTCACACAATTGCTGTTATATCAGTGATTTCCTTAATAATAGTGATAATCATTTGTCGTGTTACCTTAAAACTCTCAAAAGCTTTCTTCCTAATTTGCGGCGCTTCAATCGCCGTAATTCTCGCTGTTTTTTCATGCATACTCATAAGACACCGTTACAACAAAAGAAGAAAAGTTCTAGAATCACAGTTAAAATCTGAAGGAAGAGAGCTTAGAATAGAGTACAGTTTCTTAAGAAAAGTTGCGGGGATTCCAACGAAATATCGATACAAAGAGCTTGAAGAAGCAACGGATAATTTTCAAGCTATAATCGGTAAAGGGTCATCAGCTTCAGTTTTCAAAGGAATTCTCAATGATGGAACTTCGGTTGCTGTGAAAAGAATTCATGGTGAAGAAAGAGGTGAGAGAGAATTTAGATCAGAAGTTTCAGCTATAGCTAGTGTTCAACATGTTAATCTTGTGAGACTTTTTGGTTATTGTAATTCTCCAACACCACCTAGGTATTTGGTTTATGAGTTTATTCCAAATGGGTCATTGGATTGTTGGATTTTTCCTATGAAGGAAACAAGGACACGTAGATGTGGTTGTTTACCTTGGAATTTAAGGTATAAGGTTGCTATTGATGTTGCTAAAGCATTGAGTTATCTTCATCATGATTGTAGATCTACGGTTTTGCATCTTGATGTGAAGCCAGAGAATATACTTTTAGATGAAAATTATAAAGCACTTGTTTCTGATTTTGGTCTTTCAAAGCTTGTAGGAAAAGATGAGAGTCAAGTTATAACAACAATGAGAGGAACTAGAGGCTATTTAGCACCTGAATGGTTATTGGAACGTGGAATTTCTGAGAAAACTGATATTTATAGTTTTGGGATGGTTTTGTTGGAGATAGTAGGAGGTAGGAGAAATGTTTCAAAAGTGGATGATCCTAGAGATAATACTAAGAAAAAGTGGCAATTTTTTCCTAAAATTGTGAATGAGAAATTGAGAGAAGGGAAATTGATGGAAATTGTGGATCAAAGGGTGGTGGATAGTGGGAATTTTGATGAGAATGAGGTGAAAAGATTGGTATTTATTGCTTTGTGGTGTATACAAGAGAAGCCAAGATTGAGGCCTAGTATGGTTGAAGTTGTTGACATGCTTGAAGGACGTGTGAGGGTGGAGGAGCCACCGGGTACTAGAATGATTCTTGTTGATTTGTTAGCTGATGATGAAGATCCTACAGATCTTAATAATCTAGCAAGGTTATTGACCCCTGTCTCTAGTCATGTTGATTGTACATCTACTTACTCTTTAGGATCCACAATTTTTTCTGGTAGATAG 1338 0.3625 MEDRKVHTIAVISVISLIIVIIICRVTLKLSKAFFLICGASIAVILAVFSCILIRHRYNKRRKVLESQLKSEGRELRIEYSFLRKVAGIPTKYRYKELEEATDNFQAIIGKGSSASVFKGILNDGTSVAVKRIHGEERGEREFRSEVSAIASVQHVNLVRLFGYCNSPTPPRYLVYEFIPNGSLDCWIFPMKETRTRRCGCLPWNLRYKVAIDVAKALSYLHHDCRSTVLHLDVKPENILLDENYKALVSDFGLSKLVGKDESQVITTMRGTRGYLAPEWLLERGISEKTDIYSFGMVLLEIVGGRRNVSKVDDPRDNTKKKWQFFPKIVNEKLREGKLMEIVDQRVVDSGNFDENEVKRLVFIALWCIQEKPRLRPSMVEVVDMLEGRVRVEEPPGTRMILVDLLADDEDPTDLNNLARLLTPVSSHVDCTSTYSLGSTIFSGR* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4473 445 Gene3D Phosphorylase Kinase; domain 1 66 178 - -
Mal5g4473 445 Gene3D Transferase(Phosphotransferase) domain 1 179 395 - -
Mal5g4473 445 ProSiteProfiles Protein kinase domain profile. 103 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g4473 445 PANTHER RECEPTOR-LIKE KINASE 1 445 - -
Mal5g4473 445 SMART serkin_6 103 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g4473 445 Pfam Protein kinase domain 107 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g4473 445 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524
Mal5g4473 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Mal5g4473 445 SUPERFAMILY Protein kinase-like (PK-like) 86 387 IPR011009 -
Mal5g4473 445 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 1 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4473 Mal-Chr5 116746091 116747428 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4473 1 398 Receptor kinase-like Gene Family AT5G20050 64.090 0.0 514
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mal5g4473 Pkinase 1.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4473 - - gmx:100779485 739.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4473 5 116746091 116747428 Mal5g4473 5 116746091 116747428 ECH
Mal5g4473 5 116746091 116747428 Mal4g2367 4 59573283 59574641 PCT