LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal5g4469	ATGGAGCTAGAACTCTTGTCTTGGCTTAAACTTGTTTCTTTTTCTTTCATTTTTCTTTTCTTTGTTCTCAAACTCACAGTGTTACTATGGTGGAGACCAAGAAAAATTGAAGGCTATTTTGCTAAACAAGGAATTAGAGGACCTCCTTATCATTTCTTCATTGGAAATGTTAAAGAACTTGTTGGTATGATGTTGAAAGCTTCTTCTCAACCCATGCCTAATTTCTCTCACAACATTCTTCCTAGAGTCCTTTCCTTTTACCATCACTGGAAGAAAATTTACGGTGGAATGTTTCTAGTTTGGTTTGGACCCACTGTTCGTCTCACAGTGTCTGATCCAGACCTTATAAGGGAAATCTTCACATCCAAGTCAGAATTTTATGAAAAAAATGAAGCCCCCCCACTTGTGAAGCAGCTAGAAGGTGATGGACTTCTTAGCCTTAAAGGAGAAAAATGGGCTCACCACCGCAAAATTATCTCTCCCACTTTTCACATGGAAAATCTCAAATTGCTGATACCGGTGATGGCAACAAGCGTGGTTGAGATGTTGGAAAAATTGTCGGAAATAGCGTTTGGAAGCAGCTACCAAGATGGCAAAGCCATTTTCCGCTTACAAACCCAACAAATGATCTTAGCTGCTGATGCCTTTCAGAAAATCTTCATTCCCGGTTACAGATTCTTTCCCACAAGGAAGAATATAAAATCTTGGAAACTGGACAAAGAAATAAAGAAATCGTTGATGAAGCTAATAGAAAGAAGGAAAGAGAATATGAATAATGGGAATGAGAGAATTGAAAAAGGGCCAAAAGATTTACTAGGACTAATGATTCAAGCAAGCTCCACCAATGTGACAGTGGATGATATCGTGGAAGAGTGCAAGAGCTTTTTCTTTGCAGGCAAACAGACCACATCAAACTTGCTGACGTGGACAACCATACTCTTAGCAATGCACCCACAATGGCAAGTACAGGCACGTGATGAAGTCCTCAAGATGTGTGGGTCACGTGACCTTCCAACTAAAGATCATGTTGTAAAGCTTAAGACGCTAAACATGATTGTGAACGAGTCTCTAAGACTGTACCCACCAACAATCGCAACAATCCGACGGGCGAAAACAGACGTGGAATTAGGAGGCTACAAGATACCACGTGGGACAGAGCTTTTAATTCCAATCCTAGCCGTTCATCATGATCAAGCTTTATGGGGCAATGATGTAAATGAATTTAATCCTGGCCGTTTCTCTGAAGGTGTAGCTAGAGCTGCAAAACATCCAGTTGCATTCATACCTTTTGGCCTTGGTGTGCGCACATGTATAGGACAAAACCTTGCAGTGCTACAAACAAAATTGGCACTTGCAATCATACTGCAGCGTTTTACTTTCAGGTTGGCCCCTAGTTATCAACATGCACCAACGGTTCTGATGCTACTTTATCCTCAGTATGGTGCACCAATCATATTCAACCAATTGTCTGCTGTGGATGAAAATCATCAAGGGTCCTCATAG	1503	0.4105	MELELLSWLKLVSFSFIFLFFVLKLTVLLWWRPRKIEGYFAKQGIRGPPYHFFIGNVKELVGMMLKASSQPMPNFSHNILPRVLSFYHHWKKIYGGMFLVWFGPTVRLTVSDPDLIREIFTSKSEFYEKNEAPPLVKQLEGDGLLSLKGEKWAHHRKIISPTFHMENLKLLIPVMATSVVEMLEKLSEIAFGSSYQDGKAIFRLQTQQMILAADAFQKIFIPGYRFFPTRKNIKSWKLDKEIKKSLMKLIERRKENMNNGNERIEKGPKDLLGLMIQASSTNVTVDDIVEECKSFFFAGKQTTSNLLTWTTILLAMHPQWQVQARDEVLKMCGSRDLPTKDHVVKLKTLNMIVNESLRLYPPTIATIRRAKTDVELGGYKIPRGTELLIPILAVHHDQALWGNDVNEFNPGRFSEGVARAAKHPVAFIPFGLGVRTCIGQNLAVLQTKLALAIILQRFTFRLAPSYQHAPTVLMLLYPQYGAPIIFNQLSAVDENHQGSS*	501

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal5g4469	500	Gene3D	Cytochrome P450	30	489	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mal5g4469	500	Pfam	Cytochrome P450	84	186	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mal5g4469	500	Pfam	Cytochrome P450	183	469	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mal5g4469	500	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	430	439	IPR017972	GO:0005506\|GO:0016705
	Mal5g4469	500	SUPERFAMILY	Cytochrome P450	40	486	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mal5g4469	500	PRINTS	P450 superfamily signature	298	315	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mal5g4469	500	PRINTS	P450 superfamily signature	351	362	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mal5g4469	500	PRINTS	P450 superfamily signature	428	437	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mal5g4469	500	PRINTS	P450 superfamily signature	437	448	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mal5g4469	500	PANTHER	CYTOCHROME P450 FAMILY MEMBER	189	484	-	-
	Mal5g4469	500	PANTHER	CYTOCHROME P450 FAMILY MEMBER	6	188	-	-
	Mal5g4469	500	PRINTS	E-class P450 group I signature	91	110	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mal5g4469	500	PRINTS	E-class P450 group I signature	287	304	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mal5g4469	500	PRINTS	E-class P450 group I signature	307	333	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mal5g4469	500	PRINTS	E-class P450 group I signature	437	460	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mal5g4469	500	PRINTS	E-class P450 group I signature	427	437	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mal5g4469	500	PANTHER	CYTOCHROMEA2	189	484	-	-
	Mal5g4469	500	PANTHER	CYTOCHROMEA2	6	188	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal5g4469	Mal-Chr5	116670936	116674916	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal5g4469	1	497	Cytochrome P450	AT2G26710	74.004	0.0	794

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal5g4469	K15639		-	gmx:100780027	833.943

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mal5g4469	5	116670936	116674916	Mal5g4469	5	116670936	116674916	ECH