Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4462 ATGCCAAAAGAAAGTCTCAGGAATGCTTTTTCTTCTGCAGAGAAAGGATTTATGGAGTTTGTTGAAAAGAAATATAAAGAAACATCAAATTTACTTAGAGATGGATCTTGCTGCATAGCCTCCATTTTATGGAGAGGGACATTATATACAGCAAATCTCGGAGATTCTCGTGCAGTAATTGGGTATGTGTCCGGTTTCCCAAAAAAATTCCACGTTGAGCAATTAACAAATGATCATAACGTTAATATTGAGACCGTGAGAGAAGAGATGAAGGCAAATAATCCAGATGATGCTGATATTGTTGAGTTAAGCAGTGAAGGAGTATGGCAGATTAAAGGCATGATAGAGGTAAGTAGAAGCATTGGTCATGCTCATTTGAAGTGCCTGCCGATCTATATAAGGTCAAGGGTCAGCCATTTACTACCACAAACTAAATTTTATGGCACTAGAGCTTTATTATCAGCGGTACCCGAATTGCACTCAAGAAAAATTAAGAAGGGTGATAGGTTCATCATATTGGCATCTCATGGATTTTGGAAATTGGTGACAAATGAGAAAGCAGCTGATATTGTTAAACGCAATCCCCGAAATGAAATTGCAAAAAGACTTGTGGGATTTGCTCTAGAAGAGGCCACTAAAAAAGGGAAACCGACCAATCAAGAGCTTCCGGAGAGTGTTTCAGGCTGCATGCAGGATTGTCACGATGATATGACTGTGATTGTTTTTTTCTTTAACAAAGGGTCATATGAGAGGAGAGACACAAGAGAGGCGGTGTTACACGAAGAGACATCAAATTTTGAAAATATATACATGTCATCAGAAGAATCCGACCAATCTCACCGGCATCCCATTTCATCTTCTCAGAATCCACCAGCTATTGTGCCTATTCGTGATCCATTCATTAATAGGTTTCCCACGCAACCTATGTTTTCTGACTATTCTAAAGAGATGTTGGAGATGCAACGTGAGGTGCTGAAGATTGTACAACAACAAGCTCTGCAGCCTCCTCAACCAACTCCACATGTAAACAATTCAAGTTCTGCTCAAGAAGATAGATCAGCACAGAGGGAAGCAAATTCAGAAAACCCTTATGGAACTCTTGGTGCCAAAAGATGTTTACCAGGCGGTCTCACTGGGTTGATAAATTTTGGCCATACATGTTTCATAAATAGTGTAATACAGTGCCTTGTTCATACACCAGAATTTGCTAGGTACTTTGGGGAGGACTATAATCAAGAGGGCGAACTAGCCTTAGCATTTGGTCAGTTGCTTCTAGAACTATGGGCACCTGGGAGAATAGAACCAATTTCTCCTCGCCCTTTTAAAGAAAAGCTTTATAGTTTGACAGATCTGTTCAGTGGGCAGTACAGCCAACATGATTCTCAGTATTTCTACTGGAAGGTCTCCATGACGACTTAA 1419 0.4024 MPKESLRNAFSSAEKGFMEFVEKKYKETSNLLRDGSCCIASILWRGTLYTANLGDSRAVIGYVSGFPKKFHVEQLTNDHNVNIETVREEMKANNPDDADIVELSSEGVWQIKGMIEVSRSIGHAHLKCLPIYIRSRVSHLLPQTKFYGTRALLSAVPELHSRKIKKGDRFIILASHGFWKLVTNEKAADIVKRNPRNEIAKRLVGFALEEATKKGKPTNQELPESVSGCMQDCHDDMTVIVFFFNKGSYERRDTREAVLHEETSNFENIYMSSEESDQSHRHPISSSQNPPAIVPIRDPFINRFPTQPMFSDYSKEMLEMQREVLKIVQQQALQPPQPTPHVNNSSSAQEDRSAQREANSENPYGTLGAKRCLPGGLTGLINFGHTCFINSVIQCLVHTPEFARYFGEDYNQEGELALAFGQLLLELWAPGRIEPISPRPFKEKLYSLTDLFSGQYSQHDSQYFYWKVSMTT* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4462 472 MobiDBLite consensus disorder prediction 332 367 - -
Mal5g4462 472 MobiDBLite consensus disorder prediction 332 362 - -
Mal5g4462 472 ProSiteProfiles PPM-type phosphatase domain profile. 1 244 IPR001932 -
Mal5g4462 472 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 378 472 IPR028889 -
Mal5g4462 472 CDD PP2Cc 1 244 IPR001932 -
Mal5g4462 472 PANTHER ALPHABET, ISOFORM E-RELATED 2 255 - -
Mal5g4462 472 Gene3D Cysteine proteinases 352 468 - -
Mal5g4462 472 Pfam Protein phosphatase 2C 14 213 IPR001932 -
Mal5g4462 472 SUPERFAMILY Cysteine proteinases 376 466 IPR038765 -
Mal5g4462 472 SMART PP2C_4 1 242 IPR001932 -
Mal5g4462 472 MobiDBLite consensus disorder prediction 273 292 - -
Mal5g4462 472 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 2 255 - -
Mal5g4462 472 Gene3D - 1 255 IPR036457 -
Mal5g4462 472 SUPERFAMILY PP2C-like 2 245 IPR036457 -
Mal5g4462 472 Pfam Ubiquitin carboxyl-terminal hydrolase 378 464 IPR001394 GO:0004843|GO:0016579
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4462 Mal-Chr5 116508431 116512159 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4462 1 251 PP2C-type Phosphatase Gene Family AT4G38520 41.016 2.54e-56 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4462 K01102 - ming:122068578 200.29