Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4459 ATGGGTAGTTGGTTGTTACGACTCCATGGCAAGAATCGCGATTACTTAGATATCAACAATATATGGTCGAGGGAACTGATTCAACATCACAGAGGTCAATTTTCAATGGCTTCAATTCAATCCAACGCTGTTATGGAGGAGCATTGTCAGGTTGAGGTGGGATCAGACGCATTGTTCGTGGGCTTGTATGATGGACATGGAGGCAATGGTGCCTCCAAGTACCTAGCACATCATTTCTTACCAAAATTGCAGAGTAGTAAGCCATTTTCTTTGTTGTTTATGTTCTATAGTTTATACGCTCAATTTGAAACATTGAACCCATGGTTTTAG 330 0.4091 MGSWLLRLHGKNRDYLDINNIWSRELIQHHRGQFSMASIQSNAVMEEHCQVEVGSDALFVGLYDGHGGNGASKYLAHHFLPKLQSSKPFSLLFMFYSLYAQFETLNPWF* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4459 109 PANTHER ALPHABET, ISOFORM E-RELATED 21 84 - -
Mal5g4459 109 SUPERFAMILY PP2C-like 26 106 IPR036457 -
Mal5g4459 109 ProSitePatterns PPM-type phosphatase domain signature. 59 67 IPR000222 GO:0043169
Mal5g4459 109 Gene3D - 14 96 IPR036457 -
Mal5g4459 109 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 21 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4459 Mal-Chr5 116453622 116453951 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4459 21 83 PP2C-type Phosphatase Gene Family AT5G06750 53.968 7.47e-20 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4459 K01102 - mtr:MTR_4g113345 120.553