Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4458 ATGTTCAAGTATTTTCTTGCTGTTCTCTCCATATACACATGTTCTGTTTCAATATTTCTATGGACCTTTGTAGCACCACTACCAACATATGCTATTATAATAGAGACCGTTATCAATGGTTTCTTTTTGGTGGATATTATCTTGTCCTTTTTTGTCACGTATGTTGACAAAAAAACTCTTGCTGTTGTTGACAACAAGACCAAAATTGTTGGAAAGGCTCTTAAAATGGTTTTTCAGCGTATCAGTATGGTGTTTCCTTTTGAACTCTTTGGGATGCATTACCACCCTTCTAGCATAACCTATCAGATACTTACGTTTCTTTGCTTTGCTCGCCTTTTCCGCGTGATAAGAGTTCATCGTTTATTTTCTGAGCTTGAGATGAATGGACGTTTTAATTATACTTGGCTTCGCTTGGCAAAGATGATCTTGGCTTGCTTATTTGTTTGCCATTATGGTGGATGCGTTTTTTACTTTATAGCTACACTTAATGGTGATCCTAAGGGCACTTGGTTTGAGCTTGCCGACTCAAATTTTCTAAAGCTGAGTTTAATTGTACAATACTTGACTTCTGTGTATTGGGCTGTGACATCTTTTACCACCGTTGGATTTGGAGACTTGCATGCCGTTACAATACTTGAAAAGATCTTTTCTATATTCTTTTTGTTCCATAATATTGTAGTAGTAGCATGTGTGACAACAAAAATCAATTATATACTTGCCCCTGATGTTGGTTCAACTGGAAGATACAGAGTTCGTCGACATCGTGTGTTAAGTTTTTGTCGACAGCATAATTTACCTACTCATCTTCGAGAGGAGGTGTCCACGCACTTGGAATTAGAATATCTATCCAAATTAGAACCATCAGAGGAGCATGGTATTTTTAAGTCCCTCCCAATGCCAATCCGAGGAATGATCTTGAATTATTTGTACAATAATTACGTGACAAATAACTTTCTTTTTGTGGGGGTTTCAAATGCTATTCAACTTCAATTGGTACAAGTAATGGACCCTGTTTTTTTTCTGGCCAATTCAACGGTGATTCTACAAGATGAGGTCCCAACTTGTTTTTATTTTGTTGTTCGTGGTTCTGTGAATGCAGGAACGGCCATAACTGGAGATGTTTTTGGTCAAAGTTGTATGCTTTGTAATAAGCCACAAATTTTCACTGTTAAGACTAAGGAAGTATGCCAGCTCCTTAAGCTGGACCGTGAAACACTCTTCGACATTCTTAAGGACAATGCCACTGGTAGATCCCACATAATGAATAACGAAATCACGCGATTGAGAAGGAATAATGACCCAGACATGGTTGCCGTTTTGAGCGAAATTGAAAGGACGGCAGTCGCGCATGAAGCATAG 1359 0.3826 MFKYFLAVLSIYTCSVSIFLWTFVAPLPTYAIIIETVINGFFLVDIILSFFVTYVDKKTLAVVDNKTKIVGKALKMVFQRISMVFPFELFGMHYHPSSITYQILTFLCFARLFRVIRVHRLFSELEMNGRFNYTWLRLAKMILACLFVCHYGGCVFYFIATLNGDPKGTWFELADSNFLKLSLIVQYLTSVYWAVTSFTTVGFGDLHAVTILEKIFSIFFLFHNIVVVACVTTKINYILAPDVGSTGRYRVRRHRVLSFCRQHNLPTHLREEVSTHLELEYLSKLEPSEEHGIFKSLPMPIRGMILNYLYNNYVTNNFLFVGVSNAIQLQLVQVMDPVFFLANSTVILQDEVPTCFYFVVRGSVNAGTAITGDVFGQSCMLCNKPQIFTVKTKEVCQLLKLDRETLFDILKDNATGRSHIMNNEITRLRRNNDPDMVAVLSEIERTAVAHEA* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4458 452 PRINTS EAG/ELK/ERG potassium channel family signature 35 45 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mal5g4458 452 PRINTS EAG/ELK/ERG potassium channel family signature 46 55 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mal5g4458 452 PRINTS EAG/ELK/ERG potassium channel family signature 187 204 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mal5g4458 452 PRINTS EAG/ELK/ERG potassium channel family signature 213 224 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mal5g4458 452 CDD CAP_ED 319 413 IPR000595 -
Mal5g4458 452 Gene3D Jelly Rolls 307 434 IPR014710 -
Mal5g4458 452 SUPERFAMILY Voltage-gated potassium channels 111 276 - -
Mal5g4458 452 Pfam Ion transport protein 2 230 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mal5g4458 452 PANTHER POTASSIUM CHANNEL AKT1 3 447 - -
Mal5g4458 452 SMART cnmp_10 319 425 IPR000595 -
Mal5g4458 452 Gene3D - 1 240 - -
Mal5g4458 452 Gene3D Helix hairpin bin 244 306 - -
Mal5g4458 452 ProSiteProfiles cAMP/cGMP binding motif profile. 319 427 IPR000595 -
Mal5g4458 452 Pfam Cyclic nucleotide-binding domain 339 413 IPR000595 -
Mal5g4458 452 PANTHER POTASSIUM CHANNEL AKT1 3 447 IPR045319 GO:0005249|GO:0006813
Mal5g4458 452 SUPERFAMILY cAMP-binding domain-like 247 429 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4458 Mal-Chr5 116392646 116395154 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4458 2 444 Ion Channels AT4G32500 35.526 1.07e-92 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4458 K21867 - mtr:MTR_1g040590 330.872