Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4452 ATGGCAGCAGTTCAATCAAATGTTCACGTGGAAGATAAAAGCAAAGTTCAGGTTGGCAATGGTGCACTCATTGTTGGAGTTTATGATGGCTATAAAGGGCATATTCAGGAGAATGAGAACAACATGTCTGTGAACATTTTGAGACAAGTTGTTTCTGAAACAGAGGCAGGGTTTATTAAGTTTGCTACAAATCATTATGAGCAACATCGCCAGTCAAAGATATCTTTTGTTAGTTCAGGTTGTCTGATTTGCATTATATGGAGGGGGACAATATATATGGCCAATGTTGGAGACTCGCGTGCTATACTTGGTTCTCATAAGAGTGTTGGTTCAATTAAAAGATTGCGTGTTAAGCAAATGGTTAGAGATCACAATTGTGATAATTTGGATATTCGAGATGAACTCATTGCATTGCATCCAGATGATAATCATATTTGCTTCTATAATTTTGGAGCATGGCGTGTTAAAGGCTTGAGCGAGGTTTTATATATCTACAAGACGAGTGCCCAATACCTCGTACGAGTGTACAATGGAAAACTTACTGTCAAATGGAAGCATTGA 561 0.3815 MAAVQSNVHVEDKSKVQVGNGALIVGVYDGYKGHIQENENNMSVNILRQVVSETEAGFIKFATNHYEQHRQSKISFVSSGCLICIIWRGTIYMANVGDSRAILGSHKSVGSIKRLRVKQMVRDHNCDNLDIRDELIALHPDDNHICFYNFGAWRVKGLSEVLYIYKTSAQYLVRVYNGKLTVKWKH* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4452 186 Pfam Protein phosphatase 2C 35 129 IPR001932 -
Mal5g4452 186 Gene3D - 1 177 IPR036457 -
Mal5g4452 186 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 3 161 - -
Mal5g4452 186 SUPERFAMILY PP2C-like 7 144 IPR036457 -
Mal5g4452 186 PANTHER ALPHABET, ISOFORM E-RELATED 3 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4452 Mal-Chr5 116323803 116328596 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4452 1 161 PP2C-type Phosphatase Gene Family AT5G06750 38.202 6.17e-33 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4452 K01102 - gmx:100806476 129.028