Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mal5g4450 | ATGTCTGTAAATATTCTGAAGAAAGTTGTTTCGGAAACTGAGGCAAGGTTTATTGAGTTTGCCACAAGACATTATGAGCAACATCGTCAACCAACGATAGGTATAGTTAGTTCAGGTTGTCTGGTTTGTATCATAGAGAGAAGGACACTATATCTCGCCAACGTCGGAGACTCGCGTGCTATACTTGGTTTTGAGACGGGTTTTGGTCCATTTAAAATATTATCTGTTAAGCAAATGGCAAGAGATCACAATTGTGATAATCAGGATATTCGAGATGAACTCATTGCATTGCATCCAGATGATAATGATATTTGCTTCTATTACGAGGGAGCATGGCGTGTTAGTAGATTAAGCGAGACAAGCAGATGTATAGGATATGCACGTATGAAGAAGGCACCATTCACTACATGGACATCATTTGAAGTCCCGTGCGAGGAACGTGTGACTTCAAATATTAGTAGACCATTGCTATCAGCAGAGCCAGAGATTTAA | 492 | 0.4004 | MSVNILKKVVSETEARFIEFATRHYEQHRQPTIGIVSSGCLVCIIERRTLYLANVGDSRAILGFETGFGPFKILSVKQMARDHNCDNQDIRDELIALHPDDNDICFYYEGAWRVSRLSETSRCIGYARMKKAPFTTWTSFEVPCEERVTSNISRPLLSAEPEI* | 164 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mal5g4450 | 163 | Pfam | Protein phosphatase 2C | 17 | 162 | IPR001932 | - | |
| Mal5g4450 | 163 | PANTHER | ALPHABET, ISOFORM E-RELATED | 1 | 163 | - | - | |
| Mal5g4450 | 163 | Gene3D | - | 3 | 163 | IPR036457 | - | |
| Mal5g4450 | 163 | ProSiteProfiles | PPM-type phosphatase domain profile. | 1 | 163 | IPR001932 | - | |
| Mal5g4450 | 163 | SUPERFAMILY | PP2C-like | 5 | 148 | IPR036457 | - | |
| Mal5g4450 | 163 | PANTHER | PROTEIN PHOSPHATASE 2C 68-RELATED | 1 | 163 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mal5g4450 | Mal-Chr5 | 116258356 | 116259001 | Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mal5g4450 | 1 | 163 | PP2C-type Phosphatase Gene Family | AT3G51370 | 37.349 | 5.83e-27 | 102 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mal5g4450 | K01102 | - | mtr:MTR_7g093240 | 113.235 |