Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4447 ATGTCTGGAAATACCAAAAGAGTTCATTATGACATTAATGACTTTGATCGAGACCCTTTGGCGTGGTCGATGCCATTAGATAAACATCATTGTGGTCAATTCTCCATGGCTGCGGTTCAGTCCAATGTGAATATGGAAGATCACAGTGAAGTTAAGGTTAACAATGATGCACTCTTTGTTGGAGTTTATGATGGCCACAAAGGCGACACCACTTCTAACTATATCAGAAATCACATTTTCCAAACTCTATTGAGGCATATTCAAGAGAATGATAACAATATGTCTGTAAATATTCTGAGGAAAGTTGTTTCTGAAACTGAGGCAGGGTTTATTGAGTTTGCCACAAGACACTATGAGCAACTTCGTCAACCAGAGATAAGTATAGTTAGTTCAGGCTGTCTGGTTTGTATCATAGAGAGAAGGACACTATATCTCGCCAACGTTGGAGACTCGCGCGCTATACTTGGTTCTGAGATGGGTTATGGTCCATTTAAAAGATTGTGTGTTAAGCAAATGGTCAGAGATCACAATTGTGATAATCAGGATATTCGAGATGAACTCATTGCATTGCATCCAGATGATAATTCGATTTGCACCTATTTTGAGGGAGCATGGCGTGTTAGTAGACTAAGCGAGACAAGCAGATGTATAGGATATGCACATATGAAGAAGGCACCATTCACTACATGGACATCATTTGAAATCCCGTGGGAGAAACGTGTAACTTCAGATATTAGTAGACCTTTGCTATCAGCAGAGCCAGAGATTTATTCAAGAGTCTTAAAAGACACTGATAGATTCATTATATTTGGATCTGGTGGATTTTGGAAATTTGTGACAAATGAGCAAGCTGCTAAAATTGTTAATGCTAGTCCACGAGATGGGATCGCAAAAAGACTTGCAACGTATGCTCTAGAGATTGCAGCTGAAGAAAGGAAACAAATATATAGAGACATATTACATTTTTCTAAAGGATACAGTTTTCTTAAGAGTCGTTATTTTAGTGGAGTTAGGCCAGATTTTCATGATGATATCACTGTGATTGTTATATATTTGGACAAAAAGTCGAACGGAGATGTGAGCCTAGAGACCATGTCTTACAGGGGCCACTTTAAGACATTTAAACCTTTCGATTTTAGAAATATTTAG 1149 0.3821 MSGNTKRVHYDINDFDRDPLAWSMPLDKHHCGQFSMAAVQSNVNMEDHSEVKVNNDALFVGVYDGHKGDTTSNYIRNHIFQTLLRHIQENDNNMSVNILRKVVSETEAGFIEFATRHYEQLRQPEISIVSSGCLVCIIERRTLYLANVGDSRAILGSEMGYGPFKRLCVKQMVRDHNCDNQDIRDELIALHPDDNSICTYFEGAWRVSRLSETSRCIGYAHMKKAPFTTWTSFEIPWEKRVTSDISRPLLSAEPEIYSRVLKDTDRFIIFGSGGFWKFVTNEQAAKIVNASPRDGIAKRLATYALEIAAEERKQIYRDILHFSKGYSFLKSRYFSGVRPDFHDDITVIVIYLDKKSNGDVSLETMSYRGHFKTFKPFDFRNI* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4447 382 Pfam Protein phosphatase 2C 48 311 IPR001932 -
Mal5g4447 382 ProSiteProfiles PPM-type phosphatase domain profile. 33 352 IPR001932 -
Mal5g4447 382 SMART PP2C_4 27 350 IPR001932 -
Mal5g4447 382 Gene3D - 13 360 IPR036457 -
Mal5g4447 382 PANTHER ALPHABET, ISOFORM E-RELATED 14 366 - -
Mal5g4447 382 CDD PP2Cc 34 352 IPR001932 -
Mal5g4447 382 SUPERFAMILY PP2C-like 20 353 IPR036457 -
Mal5g4447 382 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 14 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4447 Mal-Chr5 116218152 116220977 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4447 20 379 PP2C-type Phosphatase Gene Family AT5G06750 40.934 6.68e-86 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4447 K01102 - gmx:100778238 288.885