Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4445 ATGAATTGCAAACCCTCATTTGACATAAGGCTCATATTTTGCATGCTACTATTGGTTTTACTTCTTTCCATTATAATCTTCTGTGCAGTCATCACCTTCACCCCCTCTCATGTGAAGTTCCAAATAACTGAGGCTTCCCTCACAAAGTTCAATCTTACAAGCAACAACACCATATATTACAAATTAGAAGCCAACATCACATCAAGAAATCCTAACAAGAACGTGATAGTGCATTATCAAAGTATCACTGCAATTGCGTGGTACAAAGATAATGAGTTTGCTAGTGTTAATTTGACATCTTTTGATCAAGGCCACAAGAATACCACTTTTCTTAATGTAGTGTTTGAAGGGAAGGGTGTGATCAAACTCAAACCTAAACAACTTGCTGAGTACAATGAAGAGACGCGTTTAGGGATCTATAATGACTTGGCTATTGATTTGGATTTTAGAATCACTTATAAGCTTGGAAGTTACAAGACGGATCGCTTCAATCCACCAATTGTGCAATGTCGTCGTTTGAGTCTTTCTTTGATTTCTAATGGTAACTCTTCATCACCTTCTATTCATGATACAAAATGTACAACTGGTGCTTTCTTTGGAAATCGGTAG 609 0.3695 MNCKPSFDIRLIFCMLLLVLLLSIIIFCAVITFTPSHVKFQITEASLTKFNLTSNNTIYYKLEANITSRNPNKNVIVHYQSITAIAWYKDNEFASVNLTSFDQGHKNTTFLNVVFEGKGVIKLKPKQLAEYNEETRLGIYNDLAIDLDFRITYKLGSYKTDRFNPPIVQCRRLSLSLISNGNSSSPSIHDTKCTTGAFFGNR* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4445 202 Pfam Late embryogenesis abundant protein 65 155 IPR004864 -
Mal5g4445 202 PANTHER OS05G0367900 PROTEIN 15 197 IPR044839 GO:0098542
Mal5g4445 202 PANTHER HARPIN-INDUCED 1 15 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4445 Mal-Chr5 116179734 116180342 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4445 38 198 SNARE and Associated Proteins AT1G32270 29.878 4.64e-19 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4445 - - gmx:100783747 219.55