Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4442 ATGAAGAAACAAGATAAACTTGAAGAAACTGGACTTGAATCTCAACTGGCTTCATGTTTTTCTTCCTCTTGCAAAAGTCTTTTGCTTCCTTCTAGGCCTGGCTATGGCAAACTCGGAACAAAGTGTGTTGTCAAAGCTAATTACTTCCTTGCAGATATATCAGTATCTGACTTGAGCCATTACCATGTTGATATAACTCCTGAAGTTATCTCTAGTAAAACAAGAAAAGCTATCATAGCTAAGTTAGTGAAGCTTCACAAGAACACTGAGTTGGGAAAGAAGCTCCCTGTTTATGATGGTGCAAGGAATCTTTACACTGCCGGTTCGCTTCCTTTTACACACAAAGAGTTCAATATACTTTTGATTGAGGATGATGAGGGTATTGTTACTACAAGGGAAAGAGAATTTGAAGTTGCAATCAAATATTTAGCTCATGTTAGCATGCATCAGTTACATGAGCTTCTCAGTGGAAAAAAAGTGGAAACTCCACAAGAAGCTATCAATGCCATTGACATTGTATTGAAGGAGCTTGCATCTCATAGCTATGTATCATTTGGGAGCTTACACCATTCTCCGGATTTTAAAAAACTACCTAAGCTGAGTGGTGGCTTGGAATCATGGTGCGGTTTCTATCAAAGTATAAGGCCTACTCAGATGGGATTATCACTTAATGTTGACATGGCATCCACGGCGTTTATAGAACCGCTCCCTGTGATCGACATTGCAGCTCAAATTTTAGGAAAAGATGTGCACTCAAAGCCATTGTTAGATGCAGATCGCATCAAGATTAAGAAAGCCTTAAGAGGTGTGAAAGTAGAAATTACATATAGAGGAAGTTTTAGAAGGAAGTACAGGATAACAGGATTAACATCACAGCCTACAAGGGAACTCAGTTTCCCTTTGGGTGAGAAAATGAACATGATATCAGTAATTGATTACTTTCAAGAAATGTATGGATACACAATCATGTATCCTCATTTACCTTGCCTTCAAGTAGGAAGCCAAAAGAAGGTGAACTATTTGCCTATGGAGGCATGCAAGATAGTTGGTGGTCAGAGATATACAAAAGGGCTTAATGAGAAGCAGATAACTTCTATGCTAAGAGTCTCATGCCAGCGACCACGCGAAAGGGAGAATGATATTCTACAGACAATTCATCAAAATGATTATGATTGTAATTCTTATGCAAAGGAGTTTGGAATCAGCATAGACAACAAGCTTGCATCAGTTGAGGCTCGAGTTCTTCCTGCTCCATGGTTGAAATATCATGAAACTGGAAGGGTTAAAAAAATATTGCCACAAGTTGGACAGTGGAACATGACAAACAAGAAAGTTGTAAATGGTGGCAAAATAAGATATTGGGCATGTATCAATTTCTCAAGAAGTGTCCAAGAAAAAACAGCTAGTGCATTTTGCCAACAGTTAGTTCAGACTTGCCAAAGTTTAGGCATGGAATTTAGTGAGGAACCAGTGATTCCTGTATATTCAGCAAGACCAGATATGGTTAAGAAGGCCTTGAAGTATGTACATTCTTTTTCTCTAAACAAACTTGAGGGGAAAGAGCTAGAGTTGCTCGTTGCTATTCTTCCGGACAACAATGGCTCTCTCTACGGTGATCTCAAAAAAATCTGTGAAACAGATCTCGGGCTGATTTCCCAATGTTGCCTTACAAAATATGTATTCAAGATTAATAGACAGTATTTGTCAAATGTTGCATTAAAGATCAATGTCAAGATGGGAGGAAGGAACACAGTACTTTTAGATGCACTAAGTTGCAGGATTCCATTGGTTAGTGACATTCCAACAATAATTTTTGGAGCTGATGTATCTCATCCTGAATATGGAGAGGACGTTTGTCCATCCATTGCTGCTGTTGTAGCCTCCCAAGACTGGCCAGAAGTGACAAAGTATGCAGGATTGGTATGTGCTCAGCCTCCTCGCGAGGAACTTATTAAAGATCTTTTCAAATGTTGGAACGATCCTTGTCGCGGAATCGTTTATGGTGGCATGATCAGAGAGCTCTTACTCTCATTTCAGAAAGCAACTGGAAAAAAACCATGTAGGATAATATTTTACAGGGATGGGGTAAGTGAAGGACAGTTCTATCAGGTTTTGCTATATGAGCTCGATGCCATCCGTAAGGCTTGTGCATCTTTGGAGTCTGGTTACCAACCTCCGGTTACATTTGTCGTGGTTCAAAAACGGCATCACACTAGACTCTTCGCAAACAATCACAACGACAGAAACACCATCGATAGGAGTGGGAATATCTTACCAGGTACTGTGGTGGATTCAGAGATTTGTCATCCTACTGAGTTCGACTTCTACTTATGCAGTCAAGCTGGAGTTCAGGGTACAAGTAAACCAGCTCATTATCATGTTATATGGGACGACAACAAATTCAGTGCCGATGAGATTCAGTCCTTAACTAACAACTTGTGCTACACATATGCAAGATGTACGCGATCTGTTTCTTTAGTACCTCCTGCATACTATGCTCATCTGGCAGCTTACAGAGCGCGATTCTACATGGAACCTGATGTCCATGAAAATGCAAAATCGCAGGTTACAAGATCGAAAGTCGAGTCAGTTCGGCCACTACCAGCTCTAAAAGAGAAGGTGAAGAAAGTAATGTTTTACTGCTGA 2646 0.4014 MKKQDKLEETGLESQLASCFSSSCKSLLLPSRPGYGKLGTKCVVKANYFLADISVSDLSHYHVDITPEVISSKTRKAIIAKLVKLHKNTELGKKLPVYDGARNLYTAGSLPFTHKEFNILLIEDDEGIVTTREREFEVAIKYLAHVSMHQLHELLSGKKVETPQEAINAIDIVLKELASHSYVSFGSLHHSPDFKKLPKLSGGLESWCGFYQSIRPTQMGLSLNVDMASTAFIEPLPVIDIAAQILGKDVHSKPLLDADRIKIKKALRGVKVEITYRGSFRRKYRITGLTSQPTRELSFPLGEKMNMISVIDYFQEMYGYTIMYPHLPCLQVGSQKKVNYLPMEACKIVGGQRYTKGLNEKQITSMLRVSCQRPRERENDILQTIHQNDYDCNSYAKEFGISIDNKLASVEARVLPAPWLKYHETGRVKKILPQVGQWNMTNKKVVNGGKIRYWACINFSRSVQEKTASAFCQQLVQTCQSLGMEFSEEPVIPVYSARPDMVKKALKYVHSFSLNKLEGKELELLVAILPDNNGSLYGDLKKICETDLGLISQCCLTKYVFKINRQYLSNVALKINVKMGGRNTVLLDALSCRIPLVSDIPTIIFGADVSHPEYGEDVCPSIAAVVASQDWPEVTKYAGLVCAQPPREELIKDLFKCWNDPCRGIVYGGMIRELLLSFQKATGKKPCRIIFYRDGVSEGQFYQVLLYELDAIRKACASLESGYQPPVTFVVVQKRHHTRLFANNHNDRNTIDRSGNILPGTVVDSEICHPTEFDFYLCSQAGVQGTSKPAHYHVIWDDNKFSADEIQSLTNNLCYTYARCTRSVSLVPPAYYAHLAAYRARFYMEPDVHENAKSQVTRSKVESVRPLPALKEKVKKVMFYC* 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4442 881 Gene3D - 593 881 IPR036397 GO:0003676
Mal5g4442 881 Pfam Piwi domain 525 844 IPR003165 GO:0003676
Mal5g4442 881 Pfam Argonaute linker 2 domain 376 422 IPR032472 -
Mal5g4442 881 ProSiteProfiles Piwi domain profile. 524 845 IPR003165 GO:0003676
Mal5g4442 881 PANTHER PROTEIN ARGONAUTE 10 17 880 - -
Mal5g4442 881 SMART PAZ_2_a_3 240 372 IPR003100 GO:0005515
Mal5g4442 881 Pfam N-terminal domain of argonaute 40 174 IPR032474 -
Mal5g4442 881 SUPERFAMILY PAZ domain 230 390 IPR036085 GO:0005515
Mal5g4442 881 CDD PAZ_argonaute_like 235 349 - -
Mal5g4442 881 Pfam Mid domain of argonaute 433 510 IPR032473 -
Mal5g4442 881 SUPERFAMILY Ribonuclease H-like 516 846 IPR012337 -
Mal5g4442 881 Pfam PAZ domain 262 367 IPR003100 GO:0005515
Mal5g4442 881 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 17 880 - -
Mal5g4442 881 Pfam Argonaute linker 1 domain 199 234 IPR014811 -
Mal5g4442 881 SMART DUF1785_2 183 235 IPR014811 -
Mal5g4442 881 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Mal5g4442 881 ProSiteProfiles PAZ domain profile. 236 350 IPR003100 GO:0005515
Mal5g4442 881 Gene3D - 414 587 - -
Mal5g4442 881 Gene3D paz domain 229 354 - -
Mal5g4442 881 SMART Piwi_a_2 524 845 IPR003165 GO:0003676
Mal5g4442 881 CDD Piwi_ago-like 395 844 IPR045246 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4442 Mal-Chr5 116128056 116140142 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4442 32 881 Eukaryotic Initiation Factors Gene Family AT5G43810 70.862 0.0 1315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4442 K11593 - gmx:100798086 1456.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4442 5 116128056 116140142 Mal5g4442 5 116128056 116140142 ECH