Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4438 ATGGTCTTCCTTATATCACCTGCTACAACAGTAAAACGGGAACTACTCTACGTCGGAACAAAACCTCCCGTCGACGGCGAAGATGCTGAGAAACTTCTGAAACGATCTTGTCTTTCTTCCTTTGGAATCGTTCGTTATTGTCGTCCTTTTTCCATCGTTGTTTTGATATTTAATTTTGCTGTGATGGCCAACAACAACGAGGAGCAGACTCTGAGCGGTGGTGAAAATACCTCACAGTGTATGGAGTTTGGAGATATAGAAATTGATATGAAATTTGGAATTGGATTTGTTATTGATGGAATGGAAGATATGGGGAGAATTGATTTTAAAAATTTGAGTGCAAGCGATGTAATGAAGTATCATTTTCCAAATGTTGCGGTGGCTTTTACATTTTACAATTGGTATGCTCGAATGAATGGTTTTTCTGCCCGTAAAAGCAAAGTAAGGAGAAACAGAAACGAAGAGATTATACAACAAAGATTTGTTTGCTATAGACAAGGTTTTAGAGAAACAAGGGGTGAGAACGATAAAATCCGTAAGCGTGAGGCAAGAGCTGAGACTAGGTGTGGATGTGATGCCAAATGTAGTGTGCACATTGATTCTGGTAGTCAGCGTTGGTATGTATGGGATTTTAACAATGACCATACAAACAAGTAA 657 0.3896 MVFLISPATTVKRELLYVGTKPPVDGEDAEKLLKRSCLSSFGIVRYCRPFSIVVLIFNFAVMANNNEEQTLSGGENTSQCMEFGDIEIDMKFGIGFVIDGMEDMGRIDFKNLSASDVMKYHFPNVAVAFTFYNWYARMNGFSARKSKVRRNRNEEIIQQRFVCYRQGFRETRGENDKIRKREARAETRCGCDAKCSVHIDSGSQRWYVWDFNNDHTNK* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4438 218 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 83 216 - -
Mal5g4438 218 Pfam FAR1 DNA-binding domain 130 215 IPR004330 -
Mal5g4438 218 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 83 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4438 Mal-Chr5 116023964 116025092 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal5g4438 FAR1 1.7e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4438 - - mtr:MTR_2g101460 266.544