Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4421 ATGTATTCATCAAATAGTTCCCTCAATGGAAATAACCTAGCATTTTCCTCTAAATCACCTTTTTGTAATTCCTTTGAAAGCAACTCAACTGAAAACATAATTCATTCCCCCTTTCCTCTCCCTCCTTTATCTTTCTTTCAATTCCCTAATTATTCTGATGATATTGATCCCTTTCAAGACAACCATCAAATCTTCCTTCAACAACAACATGATGTTGATTTCCAACTTCATCATCATCATCCACCACCTGTTGTGATGAATAATTCAATAATCAAAGCTAACAACAACAATATTGTTAATAATCTTCTACCTGCTGCAGCTGATGGTAAGGGCAAAACTGTAGTGGATCGGCAGATCCAAAGAATAAAAAGATCGAGCAAGAGAGACCGACACAGCAAGATCAAAACGGCGAAAGGACTAAGGGATCGGAGAATGAGATTGTCACTTGAAGTTGCAAAGAGGTTTTTTGGTCTTCAAGATATGTTAGGCTTTGAAAAAGCAAGCAAAACAGTGGATTGGTTGCTTAACCAATCCAAAGTTGAAATCAAACACCTTGCAAGAGAAAAAAATGTTCATTTTCCTACTAATAGTGCATCTTCAACTTCTGAATGTACTGAAGGAGTTTCAAGCTTGGATAATGAAGTTGGAAATCTAAAAATTGTTATGAAGAAGAGAAGAAATAGTACTAATAAGGTTTATAGAAAGAGTGCATTCAATTCTGTTGGTAGGGAAAAAGCAAGAGAAAGGGCAAGAGAAAGGACAAAAGAAAAAAAGAAGGCTAGAACATCACTAGTTGATGAATCAAATTCAAAGCAATACAATGAAGAAGGAATAAAAACTAACCTCATTTGGAACCCCTTTGAAAGCGTCAAAGAATCTGCAGGTACACATCAGAGTACTCAATGTGTGAATCATCATCCTTCCTTTGAAGCAGAAAGAACCTCTCAAAAAGCAAAGAAACAACATTCAGATGAAGATGAAGATGATTCTTTCTTCATTATGAGCAAATGGAGTCCACCTATGATGTTCAATTCTCTCAATAACCTTCAACAACATCAATTTGAACAATTTCAACAATCCATGGAAAAACCTTGGGAGGCATACAACAACCGCATCTAA 1119 0.3584 MYSSNSSLNGNNLAFSSKSPFCNSFESNSTENIIHSPFPLPPLSFFQFPNYSDDIDPFQDNHQIFLQQQHDVDFQLHHHHPPPVVMNNSIIKANNNNIVNNLLPAAADGKGKTVVDRQIQRIKRSSKRDRHSKIKTAKGLRDRRMRLSLEVAKRFFGLQDMLGFEKASKTVDWLLNQSKVEIKHLAREKNVHFPTNSASSTSECTEGVSSLDNEVGNLKIVMKKRRNSTNKVYRKSAFNSVGREKARERARERTKEKKKARTSLVDESNSKQYNEEGIKTNLIWNPFESVKESAGTHQSTQCVNHHPSFEAERTSQKAKKQHSDEDEDDSFFIMSKWSPPMMFNSLNNLQQHQFEQFQQSMEKPWEAYNNRI* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4421 372 PANTHER TRANSCRIPTION FACTOR TCP18 50 345 - -
Mal5g4421 372 MobiDBLite consensus disorder prediction 237 268 - -
Mal5g4421 372 MobiDBLite consensus disorder prediction 295 328 - -
Mal5g4421 372 ProSiteProfiles TCP domain profile. 127 185 IPR017887 -
Mal5g4421 372 MobiDBLite consensus disorder prediction 310 328 - -
Mal5g4421 372 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 50 345 IPR005333 GO:0003700
Mal5g4421 372 MobiDBLite consensus disorder prediction 295 309 - -
Mal5g4421 372 Pfam TCP family transcription factor 126 260 IPR017887 -
Mal5g4421 372 ProSiteProfiles R domain profile. 240 257 IPR017888 -
Mal5g4421 372 MobiDBLite consensus disorder prediction 238 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4421 Mal-Chr5 115720217 115721430 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4421 113 259 TCP Transcription Factor Family AT3G18550 42.763 1.77e-26 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mal5g4421 TCP 1.2e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4421 - - gmx:100803669 263.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4421 5 115720217 115721430 Mal5g4421 5 115720217 115721430 ECH