Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4396 ATGGCTGGTGGAAGAAGAAGGAGGCATCATTTCAGTAAGATCCATGCATTTTCATGTGGTAAAGCATCAATGAAACAAGATGAACATTCACTTATAGGAGGACCTGGATTTTCAAGGAAAGTTTATTGCAATGATGCAGAACGTGCTATGTCTAGTCTTTATACATATGGTGATAATTATGTTAGAACTACTAAGTATACAGTGGCTACTTTTCTACCTAAGTCTTTGTTTGAACAATTCAGAAGGGTTGCCAATTTTTACTTCTTAGTTGTTGCTGTTTTGTCTTTCTTCCCTGTTGCTCCTTATTCTGCTGTTAGCAATGTTGTTCCTCTTCTTGTTGTGGTTGCTGCTACTATGGCTAAAGAGTTTATTGAAGATTTTCAGAGGAAAAAACAGGATATAGAGATGAATAACAGAAAAGTGAAAGTACATGGTGGAGATGGTGTTTTTAACTATTCTAAATGGAGGGATTTGAAAGTTGGAGACATCGTGAAAGTGGAAAAAGATGAGTATTTTCCTGCTGATCTCATATTACTTGCATCAAACTATGATGAGGCAATTTGCTATGTTGATACGATGAATCTCGACGGAGAAACAAATCTTAAACTAAAACAATCACTGGAAGGAACTTCAAATTTGCAAGAAGACTCAAGCTTTCAAAATTTCAAGGCTGTCATAAGATGCGAAGATCCAAACGCAAATTTGTATGCATTTGTAGGAAGTTTAGAGCTTGAAGATGATCAACAATTTCCACTTGCACCTCAGCAGCTACTTCTTAGAGACTCTAAGCTAAAGAACACAGATTTTATCTATGGTGTTGTGATCTTTACCGGTCACGATACAAAGGTTATGCAGAATTCAACGGATCCTCCATCCAAGAGAAGCAAGATTGAGAAAAGAATGGATAAGGTTATATACTGTTTGTTCTTTGTATTGATTTTGGTTTCATTCATCGGTTCAATTTTCTTCGGTATTTGGACGAAGAAGGATTTGAAAAATAAAATAATGAAGAGATGGTACCTTCTACCTGAAGATACTGAAGTTTACTATGATCCTGATAGAGCAGTACTTGCAGCCATTCTGCATTTCTTGACAGCATTGATGTTGTATGGTTACTTTATTCCAATTTCGTTGTATGTTTCCATTGAAGTTGTGAAGGTTCTTCAAAGCATTTTCATCAACCAAGATTTGAACATGTATCATGAGGAAACTGATAAGCCAGCGCATGCTCGTACATCGAATTTGAACGAAGAACTTGGTCAAGTCGATACCATACTCTCTGATAAAACAGGAACATTGACTTGCAATTCTATGGAATTTATCAAGTGTTCTATTGGTGGTGTTGCTTATGGAAGAGGATTTACAGAAGTTGAGAGAGCTTTATCTAAGAGAAAAGATTCATATTTCGGTCGTAAAATGAAAAATGACCAAAATGTTGCAAAGGCTGCTGAATCAAAATCAACCATTAAAGGATTTAACTTTATGGATGAAAGGATCATGAATGGTAATTGGGTTAGACAACCTAATGCCAATGTAATCCAAAACTTCCTTAAGGTCTTGGCTGTTTGCCATACCGCAATACCTGAAGTTGATGAAGCAACCGGTAAAATTTCATACGAAGCTGAATCGCCGGATGAGGCTGCTTTTGTGGTTGCAGCCAGAGAATTTGGATTTGAATTTTATGAAAGGTCACATGCAGCTATTTCACTTCATGAATTGGACCTTCAATCAAACATGAAATTAGAAAGGTCCTACAACCTTTTAAATGTATTAGAGTTTAGTAGTGCTCGAAAGAGAATGTCTGTAATCGTAAGAGACCACAAGGGGAAACTACTACTACTTAGCAAAGGCGCTGACAGTGTCATGTTTGAACTACTTGGAAAGAATGGAAGGGAGTTTGAAGAGCAGACTAAGTATCACATTAATGAATATGCTGATTCTGGTTTGAGGACTTTGATTCTCGCCTACCGTGAGCTTGACGAGGAAGAGTACAATCAATTTAATAAAGAGTTGACAGATGCTAAAAACTTAGTGAGTGCAGATCAAGAGCAGATTGTAGAAGACATATTGCAAAACATCGAGAAGGATTTGATTCTTCTTGGCGCAACCGCAGTTGAAGATAAACTACAAGACGGGGTTCCTGAATGCATTGACAAACTAGCACAGGCTGGGATTAAGTTATGGGTATTGACCGGCGATAAAATGGAAACAGCAATTAATATTGGATTTGCTTGTAGTTTGCTTAGACAAGGAATGAAACAAATTATGATTAATTCAGATACTCCTGAAATCAAATCATTGGAGAAAATGGAGGACAAGTCTGCTGCTAACGCGGCAATTAAGGCAAGTGTTGTTCAACAAATAACGGAGGCAAAGGCGTTACTTTCTAAATCAGATAACAACTCTGAGGCATTAGCTCTGATCATTGATGGGAAGTCTCTTGCTTATGCGCTAGAAGATGATGTAAAGAACGTGTTTCTGGAACTTGCGATTGGTTGCGCATCTGTTATTTGCTGTCGTTCGTCTCCAAAACAAAAAGCACTTGTTACTAGACTGGTTAAGATGAGACCTGGCAGCACAACTCTAGCTATTGGAGATGGTGCAAATGATGTTGGTATGCTCCAAGAAGCAGATATTGGAATCGGTATCAGTGGTGTCGAAGGAATGCAGGCAGTTATGTCAAGTGATATTGCCATTGCTCAATTTCGATATCTCGAACGCTTACTTCTTGTGCATGGACATTGGTGTTACAGAAGAATCTCATCAATGATCTGCTACTTCTTTTACAAGAATATCACCTTTGGCTTCACTTTGTTCTTCTACGAGATATATACCGCATTCTCAGGCCAAGCTGCATACAATGACTGGTTCATGTCATTTTATAATGTATTCTTCACTTCACTTCCTGTAATCGCTTTAGGAGTTTTCGACCAAGACGTCTCCTCCAAATTATGTCTCAAGTTTCCACTACTATATCAAGAAGGTGTACAAAACTTACTATTCAGCTGGAAAAGAATATTCGGTTGGGCCTTAAACGGAGTAGCAAGTTCCACGATTATATTCTTCTTCTGCATTCGCGCGATGGAGCATCAAGCGTTTCGCGAAGGAGGACAAGTTGTTGACTTACAAGTTCTTGGTGCCACAATATACACATGTGTTGTGTGGGTGGTGAATTGCCAAATGGCATTATCAATCACTTACTTTACATACATACAACATATATTCATATGGGGAAGCATTGTGATATGGTACATTTTTCTCATGGCATATGGAGCCATAGATTCTTCTCTATCAACAACTGCATATAAGGTCTTCATTGAAGCATGTGCACCATCACCATCTTACTGGATTGTTACTTTGCTTGTTCTTGTTGCTGCATTGCTTCCGTATTTCGCCTTTTCCACCATTCAATTGCGGTTCTTCCCCGTTTATCATCAAATGATACAATGGATAAGAAAAGATGGACAAGTAAATGATCCTGAATTTTGTGATGTGGTACGACAAAGATCGATTCGACATACAACGGTTGGATTCACTGCTCGTTTGGAAGCTTCTAGACGATTTGAAGCGTCTAGACGTTCGGAAATATCGTTAGTACCTATTGATGGGAAGTCTGCAGGGAATCAATAA 3630 0.3826 MAGGRRRRHHFSKIHAFSCGKASMKQDEHSLIGGPGFSRKVYCNDAERAMSSLYTYGDNYVRTTKYTVATFLPKSLFEQFRRVANFYFLVVAVLSFFPVAPYSAVSNVVPLLVVVAATMAKEFIEDFQRKKQDIEMNNRKVKVHGGDGVFNYSKWRDLKVGDIVKVEKDEYFPADLILLASNYDEAICYVDTMNLDGETNLKLKQSLEGTSNLQEDSSFQNFKAVIRCEDPNANLYAFVGSLELEDDQQFPLAPQQLLLRDSKLKNTDFIYGVVIFTGHDTKVMQNSTDPPSKRSKIEKRMDKVIYCLFFVLILVSFIGSIFFGIWTKKDLKNKIMKRWYLLPEDTEVYYDPDRAVLAAILHFLTALMLYGYFIPISLYVSIEVVKVLQSIFINQDLNMYHEETDKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIGGVAYGRGFTEVERALSKRKDSYFGRKMKNDQNVAKAAESKSTIKGFNFMDERIMNGNWVRQPNANVIQNFLKVLAVCHTAIPEVDEATGKISYEAESPDEAAFVVAAREFGFEFYERSHAAISLHELDLQSNMKLERSYNLLNVLEFSSARKRMSVIVRDHKGKLLLLSKGADSVMFELLGKNGREFEEQTKYHINEYADSGLRTLILAYRELDEEEYNQFNKELTDAKNLVSADQEQIVEDILQNIEKDLILLGATAVEDKLQDGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIMINSDTPEIKSLEKMEDKSAANAAIKASVVQQITEAKALLSKSDNNSEALALIIDGKSLAYALEDDVKNVFLELAIGCASVICCRSSPKQKALVTRLVKMRPGSTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNITFGFTLFFYEIYTAFSGQAAYNDWFMSFYNVFFTSLPVIALGVFDQDVSSKLCLKFPLLYQEGVQNLLFSWKRIFGWALNGVASSTIIFFFCIRAMEHQAFREGGQVVDLQVLGATIYTCVVWVVNCQMALSITYFTYIQHIFIWGSIVIWYIFLMAYGAIDSSLSTTAYKVFIEACAPSPSYWIVTLLVLVAALLPYFAFSTIQLRFFPVYHQMIQWIRKDGQVNDPEFCDVVRQRSIRHTTVGFTARLEASRRFEASRRSEISLVPIDGKSAGNQ* 1210
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4396 1209 SUPERFAMILY HAD-like 421 919 IPR036412 -
Mal5g4396 1209 Pfam Phospholipid-translocating P-type ATPase C-terminal 892 1142 IPR032630 -
Mal5g4396 1209 PRINTS P-type cation-transporting ATPase superfamily signature 750 760 - -
Mal5g4396 1209 PRINTS P-type cation-transporting ATPase superfamily signature 864 883 - -
Mal5g4396 1209 PRINTS P-type cation-transporting ATPase superfamily signature 426 440 - -
Mal5g4396 1209 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1187 - -
Mal5g4396 1209 Coils Coil 657 677 - -
Mal5g4396 1209 Gene3D - 115 288 - -
Mal5g4396 1209 SFLD C1.7: P-type atpase like 408 915 - -
Mal5g4396 1209 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 830 947 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mal5g4396 1209 Gene3D - 544 674 IPR023299 GO:0000166
Mal5g4396 1209 SUPERFAMILY Calcium ATPase, transduction domain A 145 286 IPR008250 -
Mal5g4396 1209 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 499 701 IPR023299 GO:0000166
Mal5g4396 1209 Pfam Cation transport ATPase (P-type) 534 624 - -
Mal5g4396 1209 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1187 - -
Mal5g4396 1209 CDD P-type_ATPase_APLT_Dnf-like 58 1024 - -
Mal5g4396 1209 ProSitePatterns E1-E2 ATPases phosphorylation site. 428 434 IPR018303 -
Mal5g4396 1209 Gene3D - 696 904 IPR023214 -
Mal5g4396 1209 SUPERFAMILY Calcium ATPase, transmembrane domain M 47 1142 IPR023298 -
Mal5g4396 1209 Pfam E1-E2 ATPase 136 338 - -
Mal5g4396 1209 Pfam Phospholipid-translocating ATPase N-terminal 41 106 IPR032631 -
Mal5g4396 1209 SFLD p-type atpase 408 915 IPR044492 -
Mal5g4396 1209 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 56 1149 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mal5g4396 Mal-Chr5 115345662 115350474 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4396 1 1187 Primary Pumps ATPases AT1G68710 67.813 0.0 1743
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4396 K01530 K14802 gmx:100796405 2002.64
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4396 5 115345662 115350474 Mal5g4396 5 115345662 115350474 ECH