Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4392 ATGGCAATGGAGATTACAGCCATGGCTTCACTACCAACAACAAGACCTTCTCTTTCAACTCCTTCCACTTCACCTCACACAATCACCACTTTCTCTAAACCTCAACTTAGACGCATTTCATTACCAACTTCAACCACCCTTTCACTACTTGCTCTCTTCACCCCTCCAAATGAAGCCAGAGCTGCTGTTAACTTCTCCAAGGACCAAATTGTTTCTTCTATCACTCAAGTGGAGCAGACTATTGATCAGGTTCAGGAGGTTGGTTCTGGTTTTTTGGACTCAGCACAACGTGTTGCTGAAGCTGTAGGGAGTGCTTTAAAGCCTGGCTTCGATACGGCGTTGCCAATTGTGCAGCAGGCTGGACAAGAGGCCTTGAAAATTGCTTCTCCAGCTTTCTCTGAGGCTTCCAAGAAGGCTCAAGAAGCACTTCAAAGCTCTGGTCTTGATACCCAAACTGCTGCTAAGACAGTGGCAGATGCTGCACAACAAACAACCAAGGTGATTGAAGGTGCCAAGCCAATAGCCTCATCAACCATGGAAACTATAACTTCTTCAGATCCTACTGTGATTGCTGGAACAGCTGGAGCCCTATTTATTGCATACCTCTTGTTTCCTCCTATCTGGTCTGCCATTTCCTTCAACTTTCGCGGTTACAAAGGAGACTTGACACCAGCTCAAACACTTGATATGTTATGCACACAAAACTACGTCTTGATTGATATAAGGTCAGAGAAGGATAAGGATAAGTCCGGTATCCCTCGCCTTCCCTCTAGTGCTAAAAACAAGATGGTTGCCATTCCATTAGAAGAAGTGCCAAGCAAGATAAAAGGACTAGTGAGGAATGTGAAGAGAGTGGAAGCTGAAATAGCCGCATTAAAGATATCATATCTGAAGAAAATCAACAAAGGCAGCAACGTCGTGATCTTGGACTCGTACTCGGACTCGGCAAAGATAGTTGCAAGAACGCTAACGGGGCTTGGATTTAAGAACACATGGATAGTTGGTGATGGATTTTCTGGAGGCAAAGGGTGGTTACAGAGTAGATTAGGAACAGATTCGTATAAATTTTCGTTTGCAGAGGTTTTGTCACCATCCAGAATCATCCCTGCAAGTTTTGGAACAACCAGCAGGCAATCTAGTCAGAAACTTCTTCCTGGGGCTGACTGA 1167 0.4473 MAMEITAMASLPTTRPSLSTPSTSPHTITTFSKPQLRRISLPTSTTLSLLALFTPPNEARAAVNFSKDQIVSSITQVEQTIDQVQEVGSGFLDSAQRVAEAVGSALKPGFDTALPIVQQAGQEALKIASPAFSEASKKAQEALQSSGLDTQTAAKTVADAAQQTTKVIEGAKPIASSTMETITSSDPTVIAGTAGALFIAYLLFPPIWSAISFNFRGYKGDLTPAQTLDMLCTQNYVLIDIRSEKDKDKSGIPRLPSSAKNKMVAIPLEEVPSKIKGLVRNVKRVEAEIAALKISYLKKINKGSNVVILDSYSDSAKIVARTLTGLGFKNTWIVGDGFSGGKGWLQSRLGTDSYKFSFAEVLSPSRIIPASFGTTSRQSSQKLLPGAD* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4392 388 Gene3D - 219 358 IPR036873 -
Mal5g4392 388 CDD RHOD 226 340 - -
Mal5g4392 388 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 2 386 IPR044690 GO:0009704|GO:0071277|GO:0090333
Mal5g4392 388 MobiDBLite consensus disorder prediction 9 28 - -
Mal5g4392 388 ProSiteProfiles Rhodanese domain profile. 232 353 IPR001763 -
Mal5g4392 388 Coils Coil 275 295 - -
Mal5g4392 388 MobiDBLite consensus disorder prediction 10 28 - -
Mal5g4392 388 PANTHER CALCIUM SENSING RECEPTOR, CHLOROPLASTIC 2 386 - -
Mal5g4392 388 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 198 340 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4392 Mal-Chr5 115306680 115309711 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4392 3 311 Sulfurtransferasese or Rhodanese AT5G23060 67.732 6.13e-151 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4392 - - gmx:100813363 569.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4392 5 115306680 115309711 Mal5g4392 5 115306680 115309711 ECH