Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4379 ATGGCACAAGAAACTGTATCTTCTGGTGCTGAATCACCACAACGTCGTCAAGGTTTACTACGAGATCAAGTTCAAATAGTTAAAAGAAAAGATGGTTCTGATCGCTATGAGATTGTTCCAATTCAAGATTCTTTGTCATTTGAGAAAGGTTTCTTTATTGTTATTCGTGCATGTCAATTATTGGCTCAAAAAAATGATGGAATTGTGTTAGTTGGAGTTGCTGGTCCTTCTGGAGCTGGGAAAACTGTTTTTACTGATAAGGTTTTCAGTTTTATGCCCAGTATTGCTGTTATTACTATGGATAATTATAATGATTCTAGTCGAATCATTGATGGAAACTTTGATGACCCTCGATTGACGGATTATGATACCTTGCTAAAAAATATACAGGACCTTAAATCAGGGAAGCCTGTTCAGGTTCCGATATATGATTTCAAGTCCAGTTCTCGCATCGGATACAGGACTATTGAAGTCCCTAGCTCCCGTATCGTAATCATTGAAGGCATCTATGCCTTAAGTGAAAAATTACGACCATTGCTTGATCTTCGTGTTTCTGTCACTGGTGGAGTTCATTTTGACCTTGTCAAGCGTGTTTTGCGGGACATTCAACGAGCTGGTCAAGAGCCTGAAGAAATAATTCATCAAATCTCTGAAACGGTATATCCCATGTATAAAGCTTTTATAGAGCCTGATCTCCAAACAGCGCATATAAAAATTATTAACAAGTTTAATCCATTCACTGGATTCCAGAATCCCACCTACATATTGAAGTCAGCAAAAGTTGTGGCAGTGGATCAAATCAAGGCAGTTATTGCTGCAGAGCATACTGAAACCAAAGAGGAAACATATGATATATATCTTCTACCCCCCGGAGAAGACCCCGAAGCATGTCAATCATATTTGAGAATGAGAAATCGGGATGGGAAGTACAATCTTATGTTTGAGGAATGGGTTACGGATAGTCCATTCATTATATCACCTAGAATTACTTTTGAGGTCAGTGTGCGTCTGCTTGGAGGGCTGATGGCCTTGGGGTATACAATTGCAGCAATCCTGAAAAGAAGCAGCCATGTCTTTCACGATGATAAAGTGTCTGTAAAAACTGACTGGCTAGAACAACTGAATCGCCAATATGTCCAGGTGCAAGGGAAAGATAGAAACTATGTTAAATTTGTAGCGGAGAAACTGGGTTTGGATGGTTCCTATGTTCCTCGCACTTACATTGAACAAATTCAGCTAGAAAAGCTTGTAAATGATGTGATGGCACTGCCAGATGATCTGAAGACAAAACTCAGCATAGAAGATGATTCGGTTTCAAGCCCAAAAGAAGCACTTTCCAGAGCTTCTGCAGATAGGAGAATGAAGTATCTTAATCGTGGTATTACACAGTCATATTCAAATCAAAGGGACAAGATTCTACCTAAGTTGACTAAACTTGCTATAAATAATAGAAGTTTTAATGGGAGAGCTCTAGAATCACCTGCTCCGATTGCCAACCAAGGAGTTATCATTCAACTTTCTGATCAAATTTCCACACTAAATGAAAGAATGGATGAATTCACCTCCCGTATTGAAGAGCTGAATTCAAAGTTCGACGATAAAAAAGTTTCAGCCAGTCAACAAAACTTGGCTTTACAGGCTGACCCCTGCAATGGCTCTGGCCCCACTTCTCTCTTTGTTACTGGATTAGGCAATGGTTCATTGACTGGATCAATGCTTACTAATTCTACATCATCCTCTCACCTGGTTAGAGAGTCTCCCCTAATGGAAGAGGTATTACTTGTTGCCCGAGGACAACGTCAAATCATGCATCAACTAAACACTTTGAGCAATCTTATGCAAGAATATTTCGGAGAAAAATCACGTCTGGGAAGGACAGACCAGACAGGCGGAATGCGTGAAGTTGAATCCGTTGCCATCCCTCTGGTTCTGACTTTGGCCATTGGTGCTGTTGGTGTGTTCTTGTTCAAGGGTTTGACATCTAACAAATAA 1992 0.4011 MAQETVSSGAESPQRRQGLLRDQVQIVKRKDGSDRYEIVPIQDSLSFEKGFFIVIRACQLLAQKNDGIVLVGVAGPSGAGKTVFTDKVFSFMPSIAVITMDNYNDSSRIIDGNFDDPRLTDYDTLLKNIQDLKSGKPVQVPIYDFKSSSRIGYRTIEVPSSRIVIIEGIYALSEKLRPLLDLRVSVTGGVHFDLVKRVLRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIINKFNPFTGFQNPTYILKSAKVVAVDQIKAVIAAEHTETKEETYDIYLLPPGEDPEACQSYLRMRNRDGKYNLMFEEWVTDSPFIISPRITFEVSVRLLGGLMALGYTIAAILKRSSHVFHDDKVSVKTDWLEQLNRQYVQVQGKDRNYVKFVAEKLGLDGSYVPRTYIEQIQLEKLVNDVMALPDDLKTKLSIEDDSVSSPKEALSRASADRRMKYLNRGITQSYSNQRDKILPKLTKLAINNRSFNGRALESPAPIANQGVIIQLSDQISTLNERMDEFTSRIEELNSKFDDKKVSASQQNLALQADPCNGSGPTSLFVTGLGNGSLTGSMLTNSTSSSHLVRESPLMEEVLLVARGQRQIMHQLNTLSNLMQEYFGEKSRLGRTDQTGGMREVESVAIPLVLTLAIGAVGVFLFKGLTSNK* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4379 663 Pfam Phosphoribulokinase / Uridine kinase family 71 239 IPR006083 GO:0005524|GO:0016301
Mal5g4379 663 Coils Coil 503 530 - -
Mal5g4379 663 PANTHER URIDINE KINASE 7 651 - -
Mal5g4379 663 SUPERFAMILY CYTH-like phosphatases 263 410 IPR033469 -
Mal5g4379 663 PANTHER URIDINE-CYTIDINE KINASE C-LIKE ISOFORM X1 7 651 - -
Mal5g4379 663 Gene3D - 257 411 - -
Mal5g4379 663 ProSiteProfiles CYTH domain profile. 251 413 IPR023577 -
Mal5g4379 663 Gene3D - 69 250 IPR027417 -
Mal5g4379 663 PRINTS Uridine kinase signature 135 150 - -
Mal5g4379 663 PRINTS Uridine kinase signature 68 85 - -
Mal5g4379 663 PRINTS Uridine kinase signature 191 201 - -
Mal5g4379 663 PRINTS Uridine kinase signature 227 240 - -
Mal5g4379 663 Pfam CYTH domain 275 407 IPR023577 -
Mal5g4379 663 CDD UMPK_like 70 242 - -
Mal5g4379 663 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 239 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4379 Mal-Chr5 115208328 115215007 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4379 70 325 PRT Gene Family AT5G40870 26.415 4.66e-19 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4379 K00876 - gmx:100803122 1156.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4379 5 115208328 115215007 Mal5g4379 5 115208328 115215007 ECH
Mal7g3290 7 97231924 97249304 Mal5g4379 5 115208328 115215007 PCT