Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4368 ATGGAGCTTCCTCAATCACGTCCATGTGGAGCCGAAGGAGCAGGGAGGAAATCGACGCATGATTTTCTGTCGCTATACAGTAATTCAACTGCCGAACAAGATCCAAGGCCATCTGCTCAAGCAAGTTACCTCAAGACCCATGATTTCTTGCGGCCACTAGAAGAGGTAGAAGCGAAATCAAGTGCCAAGGAAGAAGCCGCAGAAGAAACCTCATCGGTGGTTCAGAAGCAACCTCCTTTAGCAACACCAGCTTCAGTTGAGCACCTCTTACCTGGAGGAATTGGGACTTACAGTATTAGCCACATTAATTCCTACGTCAATAATAATCAAAGGGTTCCAAAGCCAGAAGCATCACTTTTCACTGCGCATCAAGCAACTAGTGCGGATAGAAATGATGACAACTCCAACTGCAGTTCACATACTTCAAGCGGTTTCACATTGTGGGAAGAGTCTGAGATTAAAAAGGGAAAGACAGGAAAGGAGAATAATGTTGGGGAGAAACCCATTATAGGAGATTCTGCTGCTAAGTTGGGGCAATGGACATTGACGGAGCGAACGTCTCAATCATTTTCTAACAATCGTCATGGCAGCTTCAACTCCCGCTCTTCATCTCAGACAACTGGACAGAAGAACCAGAGTTTTATGGAAATGATGAAATCTGCACAGGATTGTGCCCAGGATGAAGAGCTAGAAAATGAAGGAACGTTTTTTCTCAAGAGAGAATCCTCGAATATTCAAAGAGGAGAACTAAGGGTGAGAGTGGACGGCAAGAGTACTGATCAAAAGCCAAACACACCGAGATCAAAACATTCTGCAACAGAGCAGCGAAGAAGAAGCAAAATTAATGACAGGTTTCAGATGTTGCGAGAGCTTATTCCACACAGTGATCAAAAGAGGGACAAAGCATCTTTTTTGTTAGAGGTCATTGAGTACATTCACTTTTTACAAGAGAAGGTGCATAAGTATGAAGGTTCATTCCAAGGTTGGAACAACGAGCCAGAAAAACTGATGCCATGGAGAAATAGTGACAGGCCAGCAGAAAGTTTTCCACCTCGTGGCGCAAATAGTGGGTCTAATCCATCTCCAACATTGCTGTTTGCTTCAAAGGTTGATGAGAAAAACATCGCCATCTCCCCAACAATTCATGGGGGTATCCATAATGTAGAATCTGGCTTGAGCACAAGCACAACAACTGCCTTGAAGACAATAGATCATCAGTCTGGAATAATAAACAAGGCTTTTCCAAGTCCTATTTCTTCCCAACCAAATTTTTTCACTTCAACCCAAATTGGAGGTTCAGGTGGAGCAGTGTCTCAGCTCAGACATAGATTAGCATCTGATGCAGAGAACACCATTTATCAACCTTCAGTAGAATCTCAGACTATGACTTCAACCAGTGAAAAGCTGAAAGAGAAAGAGCTCACCATTGAAGGAGGTGCCATTAGCATATCAAGCGTGTACTCACAAGGGTTGCTGGATACACTTACACAAGCCTTGCAGAGTTCGGGAGTGGATTTATCACAGGCTAGCATTTCAGTGCAAATTGAACTTGGTAAACAAGCAAGCCTCAGACCAAACGTACCAATGTCAATGTGTGTTTCCAAGGATGATGAAGATCCTTCTAAGAATCAAAGGAAGATGCGCTCTAGAGTCACTGGCTCTGAGAAGTCTGATCAAGCACTAAAGAAGCTCAAGATGTGCAGAAGTTAA 1710 0.4351 MELPQSRPCGAEGAGRKSTHDFLSLYSNSTAEQDPRPSAQASYLKTHDFLRPLEEVEAKSSAKEEAAEETSSVVQKQPPLATPASVEHLLPGGIGTYSISHINSYVNNNQRVPKPEASLFTAHQATSADRNDDNSNCSSHTSSGFTLWEESEIKKGKTGKENNVGEKPIIGDSAAKLGQWTLTERTSQSFSNNRHGSFNSRSSSQTTGQKNQSFMEMMKSAQDCAQDEELENEGTFFLKRESSNIQRGELRVRVDGKSTDQKPNTPRSKHSATEQRRRSKINDRFQMLRELIPHSDQKRDKASFLLEVIEYIHFLQEKVHKYEGSFQGWNNEPEKLMPWRNSDRPAESFPPRGANSGSNPSPTLLFASKVDEKNIAISPTIHGGIHNVESGLSTSTTTALKTIDHQSGIINKAFPSPISSQPNFFTSTQIGGSGGAVSQLRHRLASDAENTIYQPSVESQTMTSTSEKLKEKELTIEGGAISISSVYSQGLLDTLTQALQSSGVDLSQASISVQIELGKQASLRPNVPMSMCVSKDDEDPSKNQRKMRSRVTGSEKSDQALKKLKMCRS* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4368 569 PANTHER TRANSCRIPTION FACTOR BIM1 1 566 - -
Mal5g4368 569 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 1 566 IPR044295 GO:0003700|GO:0006351|GO:0046983
Mal5g4368 569 MobiDBLite consensus disorder prediction 340 360 - -
Mal5g4368 569 MobiDBLite consensus disorder prediction 123 148 - -
Mal5g4368 569 MobiDBLite consensus disorder prediction 526 569 - -
Mal5g4368 569 MobiDBLite consensus disorder prediction 1 84 - -
Mal5g4368 569 MobiDBLite consensus disorder prediction 21 40 - -
Mal5g4368 569 MobiDBLite consensus disorder prediction 535 569 - -
Mal5g4368 569 CDD bHLH_AtBIM_like 264 340 - -
Mal5g4368 569 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 265 315 IPR011598 GO:0046983
Mal5g4368 569 MobiDBLite consensus disorder prediction 186 212 - -
Mal5g4368 569 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 263 336 IPR036638 GO:0046983
Mal5g4368 569 Gene3D - 263 336 IPR036638 GO:0046983
Mal5g4368 569 MobiDBLite consensus disorder prediction 48 70 - -
Mal5g4368 569 SMART finulus 271 321 IPR011598 GO:0046983
Mal5g4368 569 MobiDBLite consensus disorder prediction 248 281 - -
Mal5g4368 569 Pfam Helix-loop-helix DNA-binding domain 267 316 IPR011598 GO:0046983
Mal5g4368 569 MobiDBLite consensus disorder prediction 123 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4368 Mal-Chr5 115037975 115045133 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4368 1 522 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G08130 48.889 2.11e-127 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal5g4368 HLH 5e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4368 - - gmx:100808016 824.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4368 5 115037975 115045133 Mal5g4368 5 115037975 115045133 ECH