Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4339 ATGAATCCTGATAATCCAGAGTTTTTTGAACTAACAGTTTGTGAGTTGTGCATGCAGGAGAAAAAGGTTAGATTGATGATGATAGAAAATTCAAGCAAAGGTTATAATAATGAAGCAGCAAAGCAAGAAGATGAACATGGAATAATGAAAAGAGAGAAATTCTCCAACAAAGCAATAGCTACATCAAGACAATGGACATCATTAAGAAATCCAAGAATAGTGAGAGTGTCACGTTCTTTAGGAGGAAAAGACAGACACAGCAAAGTGTGTACAATTAAAGGATTAAGAGACCGTAGGATTAGGTTGTCTGTACCAACAGCAATTCAGTTATATGATCTTCAAGACAGACTTGGTTTAAATCAACCTAGTAAAGTTGTTGATTGGTTAATTGAAGCAACTCAATCTGATATTGATAAATTACCACCACTTGATATTCCTCAAAGTTTTACTCAACAACAAACCCTATTTCAGCAACAAGGTAATACTTGTTTTTCTCTTGGAGGTGGTTTTTATGATATGAATAATCAAATCAAAGGTAAAGAAGCTGAAAATTCAGAAAAGGGTAATTATAATTATAACACTAATTATTCATCTAATGGTTTTCCATATAACTTGGATCCTTCAAGTACTTTATCTTTATCTCAATTTGGAAATAATTTATTTCCTTCTCATCAAAACAGTACTAGTGGCAGTGGTATGCAATTTTCATCAGCTGGTAATTCACAGTTACTTTTTTGTCCTTCTGTTATGCCATCACTTTTTACTAGTACTATGCATGCTCCATCAATGGAAAGTAGTGATATTCAAAGACAATCCAACAATGTTCAGATCTTGAACTCCTCAAGTAGTTCTTTCATTCCAACTCTTCATTTTCCGATCAATTCGCCGTTTAGACGTCATCCGACACTGTTTAGTTCCAAGCTTCTTGATTCAGATCATAATAACACCAGAAATGAGTAG 960 0.3375 MNPDNPEFFELTVCELCMQEKKVRLMMIENSSKGYNNEAAKQEDEHGIMKREKFSNKAIATSRQWTSLRNPRIVRVSRSLGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQDRLGLNQPSKVVDWLIEATQSDIDKLPPLDIPQSFTQQQTLFQQQGNTCFSLGGGFYDMNNQIKGKEAENSEKGNYNYNTNYSSNGFPYNLDPSSTLSLSQFGNNLFPSHQNSTSGSGMQFSSAGNSQLLFCPSVMPSLFTSTMHAPSMESSDIQRQSNNVQILNSSSSSFIPTLHFPINSPFRRHPTLFSSKLLDSDHNNTRNE* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4339 319 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 27 318 - -
Mal5g4339 319 Pfam TCP family transcription factor 82 180 IPR017887 -
Mal5g4339 319 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 27 318 IPR005333 GO:0003700
Mal5g4339 319 ProSiteProfiles TCP domain profile. 82 140 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4339 Mal-Chr5 114607159 114608118 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4339 65 151 TCP Transcription Factor Family AT5G60970 79.545 2.79e-46 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mal5g4339 TCP 1.4e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4339 - - mtr:MTR_4g109660 455.292