Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4333 ATGGCTGCTTTAAGCTCTGGTTCAACTCCATCATCTAACGGTGGAAGTACACCAGTTTTCTCGGACCGTGTTCTACTTTCTCACATAACCTCTAACCCCTCCTTGGGGGCTGAGAAGCCTGCATTCTTCACTATCAGAGGATTTATCAGTTTCATAAGGCCAGATCAGGAAATGTGGTATTGTGCCTGTAAGACTTGCAACAAGAAACTTACTGAAAGCATGGGTGCGGGGTACTGGTGTGAAAGTTGCCAGGAAAACGATGACGAATGCAATTTAAGATATATTATGGTTGCAAAAGTTACTGATGAAAGTGGTGAGGCTTATATTTCTATCTTCAATGAGGAAGCTGAGAAAATCATTGGGTGCTCTAATGACGAGCTAGACGACCTTAGATCACAGGAGGTAGAGGAGGGAGAAGAGAATCCTTATCAAATGAAATTGGAGCAAGCTACTTGGAATTCACACCTCTTTTGTGTTAGTGTTTCTCAGAATGAGTATAAAAACGAGAAGAGGCAAAGAATAACAACACGGGCAGTTGTTCCTATTGACTACGCTGCGGAGTCTAAATTTTACCTTGAAGGAATATCAAAGATGACAGTTACTCAATGA 609 0.4171 MAALSSGSTPSSNGGSTPVFSDRVLLSHITSNPSLGAEKPAFFTIRGFISFIRPDQEMWYCACKTCNKKLTESMGAGYWCESCQENDDECNLRYIMVAKVTDESGEAYISIFNEEAEKIIGCSNDELDDLRSQEVEEGEENPYQMKLEQATWNSHLFCVSVSQNEYKNEKRQRITTRAVVPIDYAAESKFYLEGISKMTVTQ* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4333 202 CDD RPA1_DBD_C 25 197 IPR013955 -
Mal5g4333 202 SUPERFAMILY Nucleic acid-binding proteins 21 199 IPR012340 -
Mal5g4333 202 Gene3D - 6 198 IPR012340 -
Mal5g4333 202 Pfam Replication factor-A C terminal domain 42 189 IPR013955 -
Mal5g4333 202 PANTHER REPLICATION FACTOR A 1, RFA1 1 195 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Mal5g4333 202 PANTHER REPLICATION PROTEIN A SUBUNIT 1 195 - -
Mal5g4333 202 Coils Coil 113 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4333 Mal-Chr5 114550780 114551719 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4333 1 202 Core DNA Replication Machinery Family AT5G08020 63.366 1.47e-93 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4333 K07466 - qsu:112017680 303.908