Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4297 ATGTCAGAGTTGCAGGAAACACATTCCTGTTGCTTCCTATTATTACTCTTAACTTCCTTAATCCTTCTTTCAGGTAGTGTTGTTCTTGGAGATTCATTGGACACAGACAAAGATATTCTGTTGAAGCTGAAAAGGTACTTAGACAACAAAACTCTTGCAGACCAAGGAAAGTACATATATTGGAACACAAACAGTTCCAATTCAAATCCATGTGAATGGCAAGGAATCTTGTGTAACATAGCAAAGAGGGTTATTTCCATAGACCTCTCTAACAGTGACATCACAGGAGAGATTTTCCAAAGCTTCTCTCAGCTCACTGAGCTCACACATCTCGATCTCTCGCAGAACACACTCCTTGGATATATTCCAAATGACTTGAGAAACTGTCACAAGCTCATACATCTCAATCTCTCTCACAATATTCTTAAAGGAGAATTGAACGTGACTGGATTGACAACCTTGCAGACACTTGATTTGTCCTTGAATAGATTTCATGGAGAAATTGGGCTGTTGAATTTTCCATCCATGTGTGAAAATTTAGTCACTTTGAATATCTCAAGTAATTACTTAACTGGTGAGATTGGTAATAGTTTTGATCAATGTTCAAAGTTGAAGTACTTGGATTTGAGCACCAACAAGCTGAGTGGAGGTATATGGAATGGATTTGCAAGGCTTAGGCAATTTTCTGTTGCTGAGAATCATCTCAATGGAAATATTTCATCTGAAGCTTTTCCATTGAGTTGTGAACTTGTGGAATTAGACCTTTCTCAAAATGGATTTGTTGGTGAAGCACCAAAGGAAATTGCTAACTGCAAGAATTTAACCATGTTGAATCTTTCAAGCAACAATTTTACTGGAGCTATCCCTATTGAAATGGGATCCATTTCAAAGCTTAAAGGATTGTACTTGGGAGGAAACAACTTTTCAAGAGATATTCCTGAGTCTCTTTTGAAATTGAATAGTTTGGTTTTCTTGGATTTGAGCAGAAACAAATTTGGTGGTGACATACAAAAGATTTTTGGAAAATTTAAACAGGTGAGATTTCTTCTATTGCACTCCAACTCCTACACTGGAGGATTGACATCATCTGGAATTTTCACATTGCCGAACATTACGAGGTTAGACCTTAGCTTCAACAACTTTTCAGGTCCATTGCCTGTTGAAATCTCTCATATGCAAAGTCTAAAACTTTTAATGTTATCATATAACCAATTCAATGGAACTATTCCATCAGAACTTGGAAATATGGATAATTTGCAAGCACTTGATCTTTCTTTCAACAAGATAAGTGGATCAATACCTCCAAGCCTTGGAAACTTGAGTTCACTCTTGTGGTTGATGCTTGCAAACAATTCATTAACCGGAACAATCCCTCCAGAGTTAGGGAACTGTACTAGTTTGTTATGGTTAAACCTCGCCAACAATAATCTCTCTGGAAAGTTTCCTCGCGAACTTTCCAAAATTGGAAGGAATGCGATGAAAACATTTGAAGCAAATAGGCGAGGCGATGGAATGATTGCTGGTTCTGGTGAATGTTTAGCAATGAAGAGATGGATACCTGCAGATTACCCTCCATTCAGCTTTGTGTATGATATTTTAACAAGGAAAAATTGTAGAGGACTTTGGAATAAATTGCTAAAAGGGTATGGAATTTTTCCATTTTGCACACCTGGGTCCTCCCTTAGGTTACCTTTAATATCAGGTTATGTTCAGTTAAGTGGAAACAAATTAAGTGGTGAAATTCCTTCAGAGATTGGAACTATGGTGAATTTCAGTATGTTACATTTGGGATTCAACAGTTTCTCTGGGAAATTTCCACCAGAGTTGGGAAGTCTTCCACTTGTGGTCTTGAACTTGACTAGAAACAATTTTTCAGGTGAAATTCCTCAGGAAATTGGAAACTTAAAATGCTTGCAAAATCTTGATTTGTCTCACAACAATTTCTCAGGAAATTTTCCTACAAGTTTGAACAAAGTGGCTGAGCTCAACAAGTTCAACATCTCCTATAATCCCTTCATATATGGTGAGGTTTCATCAAGTGGACAATTTGTTACTTTTGAGAAAGATTCATATTTAGGTGACCCTCTTTTGATCCTTCCCAACTTCATTGACAATAGTAGTAGAAACAATAGAAACACGACCTTTCCCAAACACCATAAAAAGCCTGCACGTTTGTCTGTGTTTTTGGTGTTTCTAACCATAACACTTGTTTTTGTCATAGTTGGTCTTCTAACAATAATTGTTTGTGCATTAGTCAAAAGTCCATCAGATCAATATCTCTTGAAGGATCATACAAAACACTGCAATGATTCAAGCAGCTCAGGAATAGGATCCTCACAATGTTTATCTGATTCAGTTAAAGTCATTCGACTATTCAAAACAGCTTTCACCTATGCAGACATTTTGAAAGCAACAAGCAGCTTCTCAGAGAACAGAATCATAGGAAAAGGTGGATTTGGAACAGTATACAAAGGAGTTTTCGCAGACGGTAGAGAAGTAGCGGTGAAGAAGCTTCTAAGTGAAGGACTTGAAGGCGAAAAGGAATTCCAAGCTGAAATGGAAGTTCTAAGTGGTCATGGTTTTGGTTGGCCTCATCCGAACCTCGTCACACTCCACGGCTGGTGCTTAAACAATTCAGAAAAGATACTTGTTTATGAATACATAGAAGGTGGAAGCTTAGAAGATCTAATAACCGATAGAACGCGTTTGACATGGAAGAAAAGACTACAAGTTGCTATCGATGTGGCTCGCGCGCTTATCTATTTACACCATGAATGCTATCCTTCAATTGTTCATAGAGATGTGAAGGCTAGTAATGTGATGCTAGACAAAGAAGGGAAAGCAAAAGTAACAGATTTTGGATTAGCTAGAGTTGTTAATGTTGGTGATAGTCATGTGAGTACAATGGTGGCAGGAACTGTTGGATATGTTGCACCTGAATATGGACAAACAATGAAAGCTACTACAAAAGGTGATGTTTATAGTTATGGTGTGTTGGTTATGGAGTTGGCTACAGGTAGAAAAGCAGTGGATGGAGGTGAAGAGTGTTTGGTTGAATGGACAAGGCGTGTCTTGGGAAGAAAACAACAACAGCATCATGTGTTGAGTCATTTGGGTTCAAGACTTGTTGGTGGGGCAGAGGAGATGGGTGAATTGCTATGTATTGGTTTGAAGTGTACAAATGAGGCACCAAATGCTAGGCCAAATATGAAACAAGTTTTGGCTATGCTTATTTTGATATCTAAATACAATGTTGGAGATTCTTCAAGTGATCATGGACACATTGTTTAG 3291 0.3789 MSELQETHSCCFLLLLLTSLILLSGSVVLGDSLDTDKDILLKLKRYLDNKTLADQGKYIYWNTNSSNSNPCEWQGILCNIAKRVISIDLSNSDITGEIFQSFSQLTELTHLDLSQNTLLGYIPNDLRNCHKLIHLNLSHNILKGELNVTGLTTLQTLDLSLNRFHGEIGLLNFPSMCENLVTLNISSNYLTGEIGNSFDQCSKLKYLDLSTNKLSGGIWNGFARLRQFSVAENHLNGNISSEAFPLSCELVELDLSQNGFVGEAPKEIANCKNLTMLNLSSNNFTGAIPIEMGSISKLKGLYLGGNNFSRDIPESLLKLNSLVFLDLSRNKFGGDIQKIFGKFKQVRFLLLHSNSYTGGLTSSGIFTLPNITRLDLSFNNFSGPLPVEISHMQSLKLLMLSYNQFNGTIPSELGNMDNLQALDLSFNKISGSIPPSLGNLSSLLWLMLANNSLTGTIPPELGNCTSLLWLNLANNNLSGKFPRELSKIGRNAMKTFEANRRGDGMIAGSGECLAMKRWIPADYPPFSFVYDILTRKNCRGLWNKLLKGYGIFPFCTPGSSLRLPLISGYVQLSGNKLSGEIPSEIGTMVNFSMLHLGFNSFSGKFPPELGSLPLVVLNLTRNNFSGEIPQEIGNLKCLQNLDLSHNNFSGNFPTSLNKVAELNKFNISYNPFIYGEVSSSGQFVTFEKDSYLGDPLLILPNFIDNSSRNNRNTTFPKHHKKPARLSVFLVFLTITLVFVIVGLLTIIVCALVKSPSDQYLLKDHTKHCNDSSSSGIGSSQCLSDSVKVIRLFKTAFTYADILKATSSFSENRIIGKGGFGTVYKGVFADGREVAVKKLLSEGLEGEKEFQAEMEVLSGHGFGWPHPNLVTLHGWCLNNSEKILVYEYIEGGSLEDLITDRTRLTWKKRLQVAIDVARALIYLHHECYPSIVHRDVKASNVMLDKEGKAKVTDFGLARVVNVGDSHVSTMVAGTVGYVAPEYGQTMKATTKGDVYSYGVLVMELATGRKAVDGGEECLVEWTRRVLGRKQQQHHVLSHLGSRLVGGAEEMGELLCIGLKCTNEAPNARPNMKQVLAMLILISKYNVGDSSSDHGHIV* 1097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4297 1096 Pfam Protein kinase domain 809 1075 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g4297 1096 ProSiteProfiles Protein kinase domain profile. 808 1079 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g4297 1096 ProSitePatterns Protein kinases ATP-binding region signature. 814 837 IPR017441 GO:0005524
Mal5g4297 1096 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 5 1082 - -
Mal5g4297 1096 SUPERFAMILY L domain-like 340 488 - -
Mal5g4297 1096 Pfam Leucine rich repeat 369 429 IPR001611 GO:0005515
Mal5g4297 1096 Pfam Leucine rich repeat 86 140 IPR001611 GO:0005515
Mal5g4297 1096 Pfam Leucine rich repeat 273 332 IPR001611 GO:0005515
Mal5g4297 1096 Pfam Leucine rich repeat 153 214 IPR001611 GO:0005515
Mal5g4297 1096 Pfam Leucine rich repeat N-terminal domain 34 79 IPR013210 -
Mal5g4297 1096 Gene3D Ribonuclease Inhibitor 559 714 IPR032675 -
Mal5g4297 1096 ProSiteProfiles Leucine-rich repeat profile. 418 441 IPR001611 GO:0005515
Mal5g4297 1096 SMART serkin_6 808 1079 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g4297 1096 Gene3D Ribonuclease Inhibitor 364 501 IPR032675 -
Mal5g4297 1096 SUPERFAMILY L domain-like 46 360 - -
Mal5g4297 1096 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 5 1082 - -
Mal5g4297 1096 Gene3D Transferase(Phosphotransferase) domain 1 888 1092 - -
Mal5g4297 1096 SMART LRR_typ_2 416 439 IPR003591 -
Mal5g4297 1096 SMART LRR_typ_2 440 464 IPR003591 -
Mal5g4297 1096 SMART LRR_typ_2 295 319 IPR003591 -
Mal5g4297 1096 SMART LRR_typ_2 105 129 IPR003591 -
Mal5g4297 1096 SMART LRR_typ_2 368 392 IPR003591 -
Mal5g4297 1096 SUPERFAMILY Protein kinase-like (PK-like) 790 1080 IPR011009 -
Mal5g4297 1096 Gene3D Ribonuclease Inhibitor 237 363 IPR032675 -
Mal5g4297 1096 Gene3D Ribonuclease Inhibitor 32 172 IPR032675 -
Mal5g4297 1096 ProSitePatterns Serine/Threonine protein kinases active-site signature. 930 942 IPR008271 GO:0004672|GO:0006468
Mal5g4297 1096 Gene3D Ribonuclease Inhibitor 173 236 IPR032675 -
Mal5g4297 1096 CDD STKc_IRAK 814 1080 - -
Mal5g4297 1096 Gene3D Phosphorylase Kinase; domain 1 773 887 - -
Mal5g4297 1096 SUPERFAMILY L domain-like 570 676 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4297 Mal-Chr5 114075942 114079378 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4297 12 1092 Receptor kinase-like Gene Family AT1G55610 31.681 1.51e-148 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Mal5g4297 Pkinase 2.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4297 - - gmx:100816573 1582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4297 5 114075942 114079378 Mal5g4297 5 114075942 114079378 ECH