Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4292 ATGGGTTGTGTGTTTGTGAAGCAAGGTGTGTCTGTGACACCAGCCATTGACCATTCAGTTGACTCAGAGAGGAATAATAGTGTAAAGAAGAAGAATAAGAAGATTACTGAGTCAATTGGTGTTAGTTGGAGCGAGGTTGGTGACTCAGGAAGAACAAGTTTGAATGGTGAAGGTGGGTCATTGAGTTTCAGGTTAGGGAATCTTAGTAAGTATGTTGAGGGAGAACAAGCCGCGGCCGGTTGGCCGGCGTGGCTTAGTGCTGTTGCTTCTGAAGCTATTCATGGTTGGGTTCCTCTTCGTTCTGATGCATTTGAAAAACTTGACAAGATTGGGCAGGGTACATATAGTAGTGTTTTCCGAGCGAAGGAGATTGAGACAGGGAAGATAGTGGCTTTAAAGAAGGTGAGATTTGACAATTTTGAGCCAGAAAGTGTGAGGTTTATGGCAAGAGAAATTATGATTCTCAGAAGGCTTGATCATCCAAATATCATAAAACTGGAGGGTTTGATTACTTCAAGATTGTCTTGTAGCATCTACCTTGTATTTGAGTACATGGAACATGATGTCACAGGGCTCTTGTCTAAACCAGAAATCAACTTTTCTGAATCACAGATTAAATGTTACATGAAACAATTGTTATCTGGTCTTGAGCACTGTCATTCAAGGGGTGTAATGCACCGTGACATTAAAGGATCAAATCTTCTGGTGAATAATGAAGGGATATTAAAGGTAGCAGATTTTGGATTGGCAAATTTCTCTAATTCTGGGAAAAAGCAGCCGCTCACAAGTCGCGTTGTCACCTTATGGTACCGTCCTCCAGAACTTTTGCTTGGTTCAACAGATTATGGTCCATCTGTGGATCTTTGGAGTGTTGGTTGTGTATTTGGAGAGCTACTAGTTGGAAAGCCTATACTTAAGGGGAGAACAGAGGTTGAACAATTGCACAAAATCTTCAAGCTTTGCGGCTCTCCACCCGATGAATACTGGAAAAAGACCAGACTTCCTCACGCAACTTTGTTCAAGCCACAGCAACCATATGATAGTTGCCTAAGAGAAACATTTAAAGATTTTCCTGCAACCAGTGTAAATTTGTTGCAAAATCTTCTTTCTATTGAACCAAACAAACGTGGAACCGCCTCATCTGCTCTCTCATTGGAGTATTTCAAAACAAAACCTTATGCATGTGACCCATCAAGCTTACCAATATACCCACCTAGCAAAGAGATCGATGCAAAACACGAGGAGGAGACAAAAAGGAAAAAGATTGCTGGGCGAGTTTGCGGACCTGATAAAAGAAGAACATCAAGAAAGCCAGTAGGACTGAGTAAATTACCTCTAGCAGAGGATTTGACAAGTCAAGTTCAAACTTCACAAAACATGGATGATAGATCTGTCCACATACTTAAAGAAGAGAACACTAACATAGGTGAAATGCCACCAAAGCCACCCAGTGGTAAACCAGAAGATGCTTCCCACATAAAGAATGCATCTCAAGTAGATATTCCTTTTCATGGACCTTTGCAAGTTTCAAAATCAAGTGGATTTGCATGGGCAAAAAGGCGTAAAGATGACACTACTTCAATTAGATCCCACACTCGATCTATTTCTAAAGGACATATATTTAGTTCATTAGAAACTTCTACACTAAATTCAAATAATATTTCTGATAATAGAAACAATGAAAATAAGGAAGTTTTTGGGGGACGCACCAGCTCCAGAGGTCACGATCTATTTGAAATTTCTAAGCTAGTGATGCAGAATCAATGGAGTAAGTTTGATCGCCCAGATTCCTTTGATACTTCTGAAGAGTACCACTCACAAGAACTGTCTATGATGCTTTATCATAGAGAAGATTCAATGTCCAAGAGAAGTAACCGGAGTTATCAGGATCAAGGAGAGAAGGTTGAATTTTCAGGGCCAATAATATCTCAAATGCATACAGTTGACGAGCTCTTAGAAAGACATGAGCGCCACATTCGGCATACAGTCCGAAGATCATGGTTTCAGAGAGGTAAGAAGCATGGGAATTGA 2031 0.4047 MGCVFVKQGVSVTPAIDHSVDSERNNSVKKKNKKITESIGVSWSEVGDSGRTSLNGEGGSLSFRLGNLSKYVEGEQAAAGWPAWLSAVASEAIHGWVPLRSDAFEKLDKIGQGTYSSVFRAKEIETGKIVALKKVRFDNFEPESVRFMAREIMILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMEHDVTGLLSKPEINFSESQIKCYMKQLLSGLEHCHSRGVMHRDIKGSNLLVNNEGILKVADFGLANFSNSGKKQPLTSRVVTLWYRPPELLLGSTDYGPSVDLWSVGCVFGELLVGKPILKGRTEVEQLHKIFKLCGSPPDEYWKKTRLPHATLFKPQQPYDSCLRETFKDFPATSVNLLQNLLSIEPNKRGTASSALSLEYFKTKPYACDPSSLPIYPPSKEIDAKHEEETKRKKIAGRVCGPDKRRTSRKPVGLSKLPLAEDLTSQVQTSQNMDDRSVHILKEENTNIGEMPPKPPSGKPEDASHIKNASQVDIPFHGPLQVSKSSGFAWAKRRKDDTTSIRSHTRSISKGHIFSSLETSTLNSNNISDNRNNENKEVFGGRTSSRGHDLFEISKLVMQNQWSKFDRPDSFDTSEEYHSQELSMMLYHREDSMSKRSNRSYQDQGEKVEFSGPIISQMHTVDELLERHERHIRHTVRRSWFQRGKKHGN* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4292 676 Gene3D Phosphorylase Kinase; domain 1 91 186 - -
Mal5g4292 676 CDD STKc_CDK9_like 104 388 - -
Mal5g4292 676 Pfam Protein kinase domain 104 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g4292 676 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 35 669 - -
Mal5g4292 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Mal5g4292 676 ProSitePatterns Protein kinases ATP-binding region signature. 110 133 IPR017441 GO:0005524
Mal5g4292 676 ProSiteProfiles Protein kinase domain profile. 104 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g4292 676 MobiDBLite consensus disorder prediction 549 567 - -
Mal5g4292 676 SUPERFAMILY Protein kinase-like (PK-like) 98 395 IPR011009 -
Mal5g4292 676 SMART serkin_6 104 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g4292 676 Gene3D Transferase(Phosphotransferase) domain 1 187 428 - -
Mal5g4292 676 PANTHER CELL DIVISION PROTEIN KINASE 35 669 - -
Mal5g4292 676 MobiDBLite consensus disorder prediction 549 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4292 Mal-Chr5 114015056 114018722 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4292 96 445 Core Cell Cycle Gene Families AT5G10270 48.641 8.54e-112 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mal5g4292 Pkinase 4.7e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4292 - - gmx:100816047 1130.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4292 5 114015056 114018722 Mal5g4292 5 114015056 114018722 ECH